Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01286 GAAGTTTCTTTTTTCTCGGTCGTTCTTTACTATAGATTTAATGAGTTTGGAGTTGATGGTGGGCCTGCAGCGAAAGCACTCAGACCAAAGTTTGATGCATTTACACATCGCGTGCATTCTCAAGTTGGCTTTCAACTCCCACAGATTGATATGAAAATTTTAATTGCTGGGGCTATTGCTCTCAAGGGCCTTGGAGGAGTTCTTTTCATATTTGGCAGCTCTTTTGGAGCTCTCCTTCTGCTCCTGCATCAGCTTATTGCTACTCCTATCCACTATGATTTTTACAATTATGAGAGCGAGGACAAAGAATTTACTCAACTTTTCATCAAATTTACACAGAATATGGCTCTCTTTGGGGCTCTGTTGTTTTTCATCGGCATGAAGAACTCCATCCCTAAAAGGCAACACAAGAAGGCACCGAAAACTAAAACCTATTAG 438 0.4087 EVSFFSVVLYYRFNEFGVDGGPAAKALRPKFDAFTHRVHSQVGFQLPQIDMKILIAGAIALKGLGGVLFIFGSSFGALLLLLHQLIATPIHYDFYNYESEDKEFTQLFIKFTQNMALFGALLFFIGMKNSIPKRQHKKAPKTKTY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01286 145 Pfam HR-like lesion-inducing 3 127 IPR008637 -
Vimu3g01286 145 PANTHER HR-LIKE LESION-INDUCER 3 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01286 Vimu-Chr3 22873385 22874409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01286 - - ccaj:109812069 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01286 3 22873385 22874409 Vimu6g02735 6 23902031 23904813 PCT