Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00123 ATGGGGTTTTCCTCTTTTCTGGGTCGCGTTCTCTTTGCCTCCCTCTTCATCCTTTCGGCATGGCAGTTGTTTAATGAATTTGATGCCAATGGTGGACCCATTTCGAAGGAGTTGATTCCCAAACTCACTGTTGTGAAGAAAAATTTGTCCTCCAAATTGGGGGTAGCACTACCAGATATTGATGCCCGGCAATTCATTTCTGTTATCATATTTCTCAAGGGAGTTGGTGGGATTTTGTTTGTGTTTGGCAGCACATTTGGATCTTTTCTACTGCTCTTACATTTGGCGCTTACCACTCCACTTCTGTACGATTTCTACAACTACAGACCTGGCAAGCCCAAGTATAATCATCTGCTGAATGAATTCATGCTGAACACGGCACTTTTCGGGGCATTGCTATTCTTTATTGGAATGAAGAACTCAATTCCCAGGAGTCAGCTCAGGAAGAAGACCCCTAAAGCGAAGACAGTTTAG 474 0.4367 MGFSSFLGRVLFASLFILSAWQLFNEFDANGGPISKELIPKLTVVKKNLSSKLGVALPDIDARQFISVIIFLKGVGGILFVFGSTFGSFLLLLHLALTTPLLYDFYNYRPGKPKYNHLLNEFMLNTALFGALLFFIGMKNSIPRSQLRKKTPKAKTV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00123 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
Vimu3g00123 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00123 Vimu-Chr3 960522 962327 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00123 - - gmx:100786502 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00123 3 960522 962327 Vimu3g00123 3 960522 962327 ECH
Vimu6g02735 6 23902031 23904813 Vimu3g00123 3 960522 962327 PCT