Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02703 ATGGCGGATGTGCTGCAGGTCCCACAGAGAGTAAATCATGTTTCAGACATGCTTATTCCTTTGGGCTGTTTAGTTTCTTCACATAAGTTCCTCACGGGCGTGATTGAAGTTATATTGAAAAAGGTGATATTTTTCGCAGTGGCAAGCATGGCAAGAGGAAGAGCAGATAGTGGCGAATCATCTATTGTTGAGTATGGGGATAAATCTTTGAGACAATTTGGTTTGAAAGGAGAGAGAGATGTGAGCGAATCTTCCTCCACACTTATTGGAGGAGAGGACAGTGCTATACCAAAGACCATTCCAGTCTGTGACGATCGTCTATCAGAGCTTATTCCTTGTCTGGACAGAAACCTTATATACCAAACAAGATTGAAGCTTGATTTAGCTGTGATGGAGCACTATGAAAGACACTGCCCAGTACCTGAGAGGCGTTATAACTGTTTGATTCCTCCTCCTCCAGGGTACAAGATTCCAATCAGCTGGCCCAAAAGCAGAGACCAGGTGTGGAAGGCAAACATACCTCATACCCATCTTGCAACTGAAAAATCTGACCAGAATTGGATGGTTGTGAAAGGTGAAAAAATAGTTTTTCCTGGTGGAGGAACCCACTTCCATTATGGTGCTGATAAATACATTGCTTCAATTGCTAATATGCTTAATTTTCCAAACAATAATATAAACAATGAGGGAAGAGTGAGGTCTGTTCTTGATGTTGGGTGTGGAGTTGCTAGCTTTGGAGGATATCTTCTTTCTTCTGATGTGATAACAATGTCGTTGGCTCCAAATGATGTCCATCAGAATCAAATTCAGTTTGCCTTAGAGAGGGGAATTCCAGCATATCTTGGTGTCTTAGGGACCCTGAGGCTCCCTTACCCAAGTAGATCTTTTGAATTTGCTCATTGTTCTCGCTGTAGAATTGATTGGCTTCAGAGAGATGGTATCCTTCTCCTTGAGCTGGATAGGTTATTGAGGCCAGGAGGTTATTTTGCATATTCATCTCCTGAAGCCTATGCAAAGGATGAGGAAGATAGGAGAATATGGAGAGAAATGAGTGCTCTTGTGGAGAGGATGTGCTGGAAAATTGCTGCTAAGAGGGATCAGACTGTTATTTGGGTCAAGCCTCTAACAAATAGTTGCTACTTAAAGAGAATGCCTGGTACTTTGCCTCCACTATGCAGATCTGATGATGATCCTGATGCTGTTTCCGGAGTTAAAATGAAAGCTTGCATTTCGCGCTATTCTGATCAAATGAACAAAGCAAAAGGAAGTGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTGGCAGAAATTCACTATTCTACTAAAATGTTTGAGAAGGACCTGGAAGTTTGGCAAGAAAGAGTTGATAATTACTGGAGCAAGCTAGGCAGTAAGATTAAAGCAGGCACAATAAGGAATGTGATGGATATGAGGGCAAATATAGGTTCATTTGCAGCAGCTTTGAAGGACAAAGATGTTTGGGTTATGAATGTGGTGCCACAAAATGAACCAAAATCTCTCGCCATAATATATGACAGAGGATTGATAGGGGCAGTTCACAACTGGTGTGAAGCTTTTTCAACCTACCCTCGAACTTATGATCTTCTTCATGCATGGACTGTATTTTCTGATATTATTAAGAAAGAATGCAGTCCAGAGGACTTGTTGATTGAGATGGATAGAATTCTGAGGCCAAAGGGCTTCATCATTGTCTATGATAAGCGGTCAGTGGTGGAGTATGTGAGGAAATACTTGCCTGCATTACACTGGGAAGTTCTGACAATTTATGACATAGATCAAGGTAAAGGTGATGATGATGATGAGGAAGATGATCATGCAGTGCTTATAATTCAAAAGAAGATGTGGCTCACAAGTGATAGTATCCAGGTTTTAGAATAG 1914 0.4169 MADVLQVPQRVNHVSDMLIPLGCLVSSHKFLTGVIEVILKKVIFFAVASMARGRADSGESSIVEYGDKSLRQFGLKGERDVSESSSTLIGGEDSAIPKTIPVCDDRLSELIPCLDRNLIYQTRLKLDLAVMEHYERHCPVPERRYNCLIPPPPGYKIPISWPKSRDQVWKANIPHTHLATEKSDQNWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNNINNEGRVRSVLDVGCGVASFGGYLLSSDVITMSLAPNDVHQNQIQFALERGIPAYLGVLGTLRLPYPSRSFEFAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAKDEEDRRIWREMSALVERMCWKIAAKRDQTVIWVKPLTNSCYLKRMPGTLPPLCRSDDDPDAVSGVKMKACISRYSDQMNKAKGSGLAPWPARLTTPPPRLAEIHYSTKMFEKDLEVWQERVDNYWSKLGSKIKAGTIRNVMDMRANIGSFAAALKDKDVWVMNVVPQNEPKSLAIIYDRGLIGAVHNWCEAFSTYPRTYDLLHAWTVFSDIIKKECSPEDLLIEMDRILRPKGFIIVYDKRSVVEYVRKYLPALHWEVLTIYDIDQGKGDDDDEEDDHAVLIIQKKMWLTSDSIQVLE 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02703 637 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 87 627 IPR004159 GO:0008168
Vimu6g02703 637 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 374 IPR029063 -
Vimu6g02703 637 Gene3D Vaccinia Virus protein VP39 203 370 IPR029063 -
Vimu6g02703 637 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 445 598 IPR029063 -
Vimu6g02703 637 FunFam probable methyltransferase PMT3 207 374 - -
Vimu6g02703 637 FunFam Probable methyltransferase PMT19 442 605 - -
Vimu6g02703 637 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 109 602 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02703 Vimu-Chr6 23566590 23571374 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02703 - - gmx:100805403 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02703 6 23566590 23571374 Vimu6g02703 6 23566590 23571374 ECH
Vimu6g02703 6 23566590 23571374 Vimu3g00098 3 778019 782736 PCT
Vimu3g01336 3 24337146 24341547 Vimu6g02703 6 23566590 23571374 PCT