Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01336 ATGTCCCAGTTTAACGCAACCTCTGAAGTGAAGAGACGCGGAGTCTTAGTGACAAAAATGGGCAGAGGGAGAGCAGATGGGAAACCAAGAAAGCGATTGGTCATAACTGTGATAGTTTTAGTGATTGTCGGTGCTTTCTTTTACCTGTATTCTAGGGATAGCGCTTCATCTTCTATTGAGTATGGTAGCAAGTCTTTGACATTTGGAGGAGATGACAGTGCTATACCGAAGACCATTCCAGTCTGTGATGATCGACTCTCGGAGCTAATTCCGTGTTTAGACAGAAATTTCATATACCAAACAAGGTTGAAGCTTGATCTGACTATGATGGAGCACTACGAGCGACACTGTCCCATGCCTGAGAGGCGCTATAATTGTTTGATTCCCCCTCCTCCAGGATACAAGATTCCAATCAAGTGGCCCAAAAGCAGAGATCAGGTATGGAGGGCAAATATACCTCATACTCATCTTGCAACTGAGAAATCTGACCAGAGATGGATGGTTGTAAAAGGTGAAAAGATAGTTTTTCCTGGTGGAGGAACTCACTTCCATTACGGTGCTGACAAATATATTGCATCAATTGCCAATATGCTTAACTTTCCAAACAATATCATAAATGACGAAGGAAGACTTCGCAATGTTTTTGATGTTGGCTGTGGTGTTGCAAGCTTTGGAGGATATCTTCTTTCTTCTGATGTAATAGCAATGTCATTAGCACCAAATGATGTTCATGAAAACCAAATACAGTTTGCTTTAGAAAGAGGAATTCCCTCATATCTTGGTGTCTTGGGGACATTAAGACTCCCTTACCCTAGTAGATCTTTTGAACTTGCCCATTGTTCTCGCTGTAGAATTGACTGGCTTCAAAGAGATGGCATACTTCTTCTTGAGCTAGATAGGTTACTCAGGCCAGGAGGCTACTTTGCGTACTCATCTCCTGAAGCCTATGCTCAGGATGAAGAGGATCGAAGAATATGGAGGCAAATGAGTGCTCTTGTAGAGCAGATGTGTTGGAAAGTTGCTGCTAAGAAGAACCAAACTGTCATATGGGTGAAGCCTCTTACAAATGACTGCTACTTAAAAAGAGAGCCTGATACTCACCCTCCCCTCTGCAGTCCTGATGATGATCCTGATGCTGTTTGGGGAGTTAAAATGAAAGCTTGCATATCACGTTACTCTGATCAGATGCACAGAGCAAGAGGATCTGGTTTGGCTCCTTGGCCAGCTCGATTGACTACTCCACCTCCTCGTCTTGCTGACTTTAACTATTCTACTGAAATGTTTGAAAAGGACATGGAACATTGGCACCAAGAGGTTGTTAATTACTGGAAAATGCTTGGCAATAAAATTAAGCCAGATACAATTCGGAATGTGATGGACATGAAGGCACATTTGGGCTCATTTGCTGCTGCTTTGAAGGACAAAGACGTTTGGACTATGAATGTGGTGCCAGAAAATGGACCAAACACTCTCAAGATCATATATGATAGAGGGCTGTTAGGAACGATTCACAACTGGTGTGAAGCATTTTCAACCTACCCTCGAACTTATGACTTGCTCCATGCATGGGGTATATTTTCTGATATCATTGAGAAAGAATGCAGTCCGACGGATTTATTGATTGAAATGGATAGAATCCTGAGGCCTAAAGGTTTCGTCATTGTCCATGATAAGCGGTCAGTGGTGGTGTTTATAAAGAAGTTCTTGCCAGCATTGCACTGGATTTCAGTGGCCACATCTAATCTCGAGAAAGATTCAAGCCAAGACAAAGATGATGCAGTTTTGATAATTCAGAAGAAGATTTGGTTGACAAGTGAGAGCATCCGGGTTTCAGAATAG 1839 0.4241 MSQFNATSEVKRRGVLVTKMGRGRADGKPRKRLVITVIVLVIVGAFFYLYSRDSASSSIEYGSKSLTFGGDDSAIPKTIPVCDDRLSELIPCLDRNFIYQTRLKLDLTMMEHYERHCPMPERRYNCLIPPPPGYKIPIKWPKSRDQVWRANIPHTHLATEKSDQRWMVVKGEKIVFPGGGTHFHYGADKYIASIANMLNFPNNIINDEGRLRNVFDVGCGVASFGGYLLSSDVIAMSLAPNDVHENQIQFALERGIPSYLGVLGTLRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWRQMSALVEQMCWKVAAKKNQTVIWVKPLTNDCYLKREPDTHPPLCSPDDDPDAVWGVKMKACISRYSDQMHRARGSGLAPWPARLTTPPPRLADFNYSTEMFEKDMEHWHQEVVNYWKMLGNKIKPDTIRNVMDMKAHLGSFAAALKDKDVWTMNVVPENGPNTLKIIYDRGLLGTIHNWCEAFSTYPRTYDLLHAWGIFSDIIEKECSPTDLLIEMDRILRPKGFVIVHDKRSVVVFIKKFLPALHWISVATSNLEKDSSQDKDDAVLIIQKKIWLTSESIRVSE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01336 612 Gene3D Vaccinia Virus protein VP39 189 357 IPR029063 -
Vimu3g01336 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 420 563 IPR029063 -
Vimu3g01336 612 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 76 602 IPR004159 GO:0008168
Vimu3g01336 612 FunFam probable methyltransferase PMT3 186 353 - -
Vimu3g01336 612 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 88 599 IPR004159 GO:0008168
Vimu3g01336 612 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 374 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01336 Vimu-Chr3 24337146 24341547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01336 - - gmx:100819500 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01336 3 24337146 24341547 Vimu6g02703 6 23566590 23571374 PCT