Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00098 ATGTCGAGGGGAAGATCTGATGGATCGCAAAAGAAGCGTGTAGTTGCTTATGCTTGTGGCGTGGCAATCTTTGTCGGATTTTTGTATGTGTACCAAGGATCCATCTTTGGTTCTCAGAAGGTTAGTTCATCTGCACTTGAATATGGGAGCAAGTCATTGAAAAGACTTGGGGTATCATATTTGGGCACAGATGATGCTTCTGATAGCAAGCAAGAGGATTCTTCACCAAGGATTGGGCTGGGAGATGGTCAGGATGATATTGTACCGAAGAGTTTCCCTGTTTGTGATGATAGTCATTCGGAGTTGATTCCTTGTCTAGACAGACATCTTATCTATCAATTGAGATTGAAGCTGGATCTTTCTTTGATGGAACATTATGAGAGACACTGTCCTCCTCCAGAGAGGAGATTCAATTGTTTGATTCCTCCTCCGGCAGGATATAAGATCCCTATAAAGTGGCCACAGAGCAGAGATGAGGTATGGAAAGCAAACATACCACACACTCACCTTGCACATGAGAAATCTGACCAGAACTGGATGATCGTAAAAGGTGAAAAGATAGTGTTTCCTGGAGGAGGGACACATTTTCATAAAGGAGCTGACAAGTACATTGCATCAATTGCAAATATGCTCAATTTTTCACAAAATATTCTTAATAATGAAGGAAGACTGCGGACAGTTCTTGATGTTGGATGTGGTGTTGCGAGTTTTGGAGCTTATCTTCTTTCATCTGATATCATTGCAATGTCCTTGGCACCCAATGATGTGCATCAAAATCAAATTCAATTTGCTCTAGAGAGAGGAATTCCTGCATATCTTGGTGTCTTGGGAACCAAGAGACTCCCTTACCCAAGCAGATCTTTTGAACTTGCACACTGTTCTCGGTGCCGAATCGACTGGCTTCAGAGGGATGGAATACTACTCCTTGAGCTAGACCGGTTGCTTAGGCCAGGAGGTTACTTTGCATACTCATCTCCAGAAGCATATGCTCAGGATGAAGAGGATAGAAGGATATGGAGAGAAATGAGTGCCCTTGTGGGACGTATGTGTTGGAGAATTGCTGCCAAGAGGGACCAGACTGTCATCTGGCAAAAACCTCTTACGAATGAATGTTATATGGAGAGAGAACCCGGCACTCGCCCTCCTCTTTGCCAGTCTGATGACGACCCAGATGCAATTTGGGGAGTAAATATGGAAGCTTGCATCACACCTTACTCTGACCGTGGTGGATTAGCTCCATGGCCTATGAGACTGACCACTCCTCCTCCTAGATTAGCTGACTTTGGCTATTCAAATGAAAAGTTTGAAAAGGATACGGAACTATGGCAAGGAAGAGTTGAGAATTACTGGAATCTGGTGGGTCCTAAAATGTCATCAAAGATGGTGAGGAATGTGATGGACATGAAAGCAAACATGGGTTCATTTGCAGCTGCTCTCAGAGGCAAGGATGTTTGGGTGATGAATGTTGTACCACGTGATGGACCAAACACGCTAAAGATTATATATGACAGAGGCCTCATAGGGTCTATCCATGACTGGTATTACAACTGGTGTGAAGCATATTCAACATACCCCCGGACTTATGATTTACTCCATGCATGGAGTGTGTTTTCTGACATTGATAAGAGAGGGTGCAGTCCAGTGGATCTACTGATTGAGATGGATCGTCTATTGAGGCCTACTGGTTTCATCTTCATAAGGGATAAGCAAGCTGTGATTGATTTTGTGAAGAAGTACCTAACAGCATTGCACTGGGAAGAAGTTGCAACTGCAGATGCAGGTTCAGACTCTGACCAAGATGCCAATGAAGTGATTTTGGTTGTCCAGAAGAAATTGTGGCTCACGAGTGAAAGTTTTAGGAATACAGAATAG 1872 0.4359 MSRGRSDGSQKKRVVAYACGVAIFVGFLYVYQGSIFGSQKVSSSALEYGSKSLKRLGVSYLGTDDASDSKQEDSSPRIGLGDGQDDIVPKSFPVCDDSHSELIPCLDRHLIYQLRLKLDLSLMEHYERHCPPPERRFNCLIPPPAGYKIPIKWPQSRDEVWKANIPHTHLAHEKSDQNWMIVKGEKIVFPGGGTHFHKGADKYIASIANMLNFSQNILNNEGRLRTVLDVGCGVASFGAYLLSSDIIAMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFAYSSPEAYAQDEEDRRIWREMSALVGRMCWRIAAKRDQTVIWQKPLTNECYMEREPGTRPPLCQSDDDPDAIWGVNMEACITPYSDRGGLAPWPMRLTTPPPRLADFGYSNEKFEKDTELWQGRVENYWNLVGPKMSSKMVRNVMDMKANMGSFAAALRGKDVWVMNVVPRDGPNTLKIIYDRGLIGSIHDWYYNWCEAYSTYPRTYDLLHAWSVFSDIDKRGCSPVDLLIEMDRLLRPTGFIFIRDKQAVIDFVKKYLTALHWEEVATADAGSDSDQDANEVILVVQKKLWLTSESFRNTE 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00098 623 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 370 IPR029063 -
Vimu3g00098 623 Gene3D Vaccinia Virus protein VP39 213 365 IPR029063 -
Vimu3g00098 623 MobiDBLite consensus disorder prediction 63 84 - -
Vimu3g00098 623 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 610 IPR004159 GO:0008168
Vimu3g00098 623 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 613 IPR004159 GO:0008168
Vimu3g00098 623 FunFam probable methyltransferase PMT3 199 366 - -
Vimu3g00098 623 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 446 584 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00098 Vimu-Chr3 778019 782736 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00098 - - gmx:100806600 1159.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02703 6 23566590 23571374 Vimu3g00098 3 778019 782736 PCT