Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02684 ATGGGTATGGGATGTAGGGCTAAACCTCTGGAGAAGCCAAACGCAAGCCCCAAAAAGAAAGTGACTTTTGATGTCAACGTGAAAACGTACGAGCCAGATGAAGTTGTTGATTTCCAACCAGAGAAGAGTGAAGAGAAAAGACCTTCGGTTGAAACGTTAAGCCAAACAAAGTCTGAAGAAAGTTCGGTTACTTCAACCGGGTCTTACCCAACAGACCATAGGTACCACAATTGCACATGTAGTGATGATGAAGATGCAGCAATGGAGTATTGGGATAGTGATTTGACTGATGAGGATGAGGATGATGGTGGTGATAGTGACGTGGGAGAAGAATATGATGAAGTGGGGGAAGACTTTGAAGATGGAATAGTGTACTCAAGGTCAAGAAATGGTGATAATCAAGAGGTTGTTGCAGAGGTGGAAAGTCCAATTCCAGGGTACGATAAGGATGTGAAGTCAATTGGGTTGAACCCCAATGTTCGAGATAGGAGTGTGTATGTTCATTCTGTGCTGAACCCTGTGGAGAACCTCACTCAATGGAAAGCAGTTAAGGCTAAAAGAGGACCACCATTGGTGTCTCAGAAGGAGAATTTGGTTTCGAAGCAAGAGTCCCGACCTGCATTTGGTGCTGAATCACCCAAGAAGTTGAACCGGGAAATCGCAGTTGATGCTAGCCTTGCCAATTGGTTAGGTTCATCAGAAACTACACCTGTTAGCAAGAGTTCGTATGCAGAGAGAAGTAGCTCACATGGCTCAAATACTGTGGTGAGCCATGAAGATAGGCCTATTTTAGGTGCATTATCAGTTGAAGAGCTTAAACAGTTTTCAGCTTCTTGTTCACCAAGAAAATCACCAAGAGATGAGATTGGCATCATAGGCAGTGTTGGTAGCTACTGGAATTGTGGGAGCTATGCTCAGGATTCTGGCTCAGCAAATCGAGTGACTTCAAGAAGGATACAATACAATTGA 969 0.4396 MGMGCRAKPLEKPNASPKKKVTFDVNVKTYEPDEVVDFQPEKSEEKRPSVETLSQTKSEESSVTSTGSYPTDHRYHNCTCSDDEDAAMEYWDSDLTDEDEDDGGDSDVGEEYDEVGEDFEDGIVYSRSRNGDNQEVVAEVESPIPGYDKDVKSIGLNPNVRDRSVYVHSVLNPVENLTQWKAVKAKRGPPLVSQKENLVSKQESRPAFGAESPKKLNREIAVDASLANWLGSSETTPVSKSSYAERSSSHGSNTVVSHEDRPILGALSVEELKQFSASCSPRKSPRDEIGIIGSVGSYWNCGSYAQDSGSANRVTSRRIQYN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02684 322 MobiDBLite consensus disorder prediction 233 256 - -
Vimu6g02684 322 MobiDBLite consensus disorder prediction 1 118 - -
Vimu6g02684 322 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 10 306 IPR039300 GO:0007142
Vimu6g02684 322 MobiDBLite consensus disorder prediction 12 53 - -
Vimu6g02684 322 MobiDBLite consensus disorder prediction 54 75 - -
Vimu6g02684 322 MobiDBLite consensus disorder prediction 193 212 - -
Vimu6g02684 322 MobiDBLite consensus disorder prediction 85 118 - -
Vimu6g02684 322 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02684 Vimu-Chr6 23428114 23429082 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02684 - - vun:114173845 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02684 6 23428114 23429082 Vimu6g02684 6 23428114 23429082 ECH
Vimu6g02684 6 23428114 23429082 Vimu2g01645 2 11710638 11712531 ECH
Vimu6g02684 6 23428114 23429082 Vimu3g01430 3 27090288 27091862 ECH
Vimu6g02684 6 23428114 23429082 Vimu3g01430 3 27090288 27091862 PCT