Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01430 ATGGGTTGCTTTTTTGGTTGCTTTGGTTCCTCCAAACACTCAAACAACAAGCGCAAGGTTCTTAGAAATGGTAGTAGCAATGGCAAGCAAGAGCAACCTACTGTCTCTCTGGTTCCGGATTGCTCCAAAAATGCCGTTAACCCTATACCACAACTCCTGGAGAAAAGTGCGGAGCAACTGAGTGTAAGTAGCAGAAAGAAAGTGACATTTGATTCCAACGTGAAGACCTATGAACCTTCTTTGGTGGATGAAGTTGGAGAGAGGAAGAATGAGGATGTTGGAGAGGAAGCTTTGGTTCATCCAAAGTCATCTTCCTCTGAAGATATTAGTTGTGTTTCTTCAACGGGGTCTTACCCACCCAACCATAGGTACCAGAATTGCCGGGACAGTGAGGACGAGGAGGAAGAGATTGATTATGGGGACAGTGATCTTAGTGATGAGGATGATGATGTCATCAGAGAAGAGTGCAAAGAATTGGGGGAGGACTTTGGAGAAGATGGCACGGTAGCAACTACTGCTGCTGATCATGTGTTTTCTGAAGAGGTTGATGTGAAGTCAATCGAGTCCAACCTCAATGCCAGAGACAGAAGTGTTTATGTTCATCCTGTACTGAAACCAGTGGAGAATCTCACTCAGTGGAAAGTTGTGAAGTCTAAGAAAACGCCCTTAAGACCTCAGAAAGAAAATGAGTTTGGGGAAGGTGTGGAAGAATCACCTTTCAGCTTGAAATCAGAAAGTGACACACCGAAGAAGTTGAACCAGGAGATCCCTGTTGACGCCAGCCTATCAAATTGGTTGGTCTCTCCAGAGACTACACCTCTTAACAAGGCTGGCTCAGTGACTTTATTTCCTGGTACGCCTGACAGGAGCACCCCACAAAGTCCATATTCTGTGTTAAGTCACGAAGATAGGCCAATTTTGGGTGCATTGACATTAGAAGAGATCAAACAATTTTCGGCTACTTCTTCTCCAAGGAAGTCACCTAGTAGGAGTCCAGACGAAATGCCTATTATTGGCACTGTTGGGACCTACTGGAATTTTGCAGCCTCATCGGAAGGTTCTGGCTCAGCCTCTTCCTTTAAAGGAATTCCGAACTCAACAAGCAAGTACAGAGAGGATAAGAGAGTGAATTGGCACTCAACCCCTTTTGAGACAAGATTAGAGAAAGCTTTGAATAGAGGTGCTGCTTCTTATGTTCCTCGTGTATTTTAG 1212 0.4472 MGCFFGCFGSSKHSNNKRKVLRNGSSNGKQEQPTVSLVPDCSKNAVNPIPQLLEKSAEQLSVSSRKKVTFDSNVKTYEPSLVDEVGERKNEDVGEEALVHPKSSSSEDISCVSSTGSYPPNHRYQNCRDSEDEEEEIDYGDSDLSDEDDDVIREECKELGEDFGEDGTVATTAADHVFSEEVDVKSIESNLNARDRSVYVHPVLKPVENLTQWKVVKSKKTPLRPQKENEFGEGVEESPFSLKSESDTPKKLNQEIPVDASLSNWLVSPETTPLNKAGSVTLFPGTPDRSTPQSPYSVLSHEDRPILGALTLEEIKQFSATSSPRKSPSRSPDEMPIIGTVGTYWNFAASSEGSGSASSFKGIPNSTSKYREDKRVNWHSTPFETRLEKALNRGAASYVPRVF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01430 403 MobiDBLite consensus disorder prediction 103 124 - -
Vimu3g01430 403 MobiDBLite consensus disorder prediction 11 41 - -
Vimu3g01430 403 MobiDBLite consensus disorder prediction 11 43 - -
Vimu3g01430 403 MobiDBLite consensus disorder prediction 221 249 - -
Vimu3g01430 403 MobiDBLite consensus disorder prediction 131 150 - -
Vimu3g01430 403 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 394 IPR039300 GO:0007142
Vimu3g01430 403 MobiDBLite consensus disorder prediction 277 298 - -
Vimu3g01430 403 MobiDBLite consensus disorder prediction 89 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01430 Vimu-Chr3 27090288 27091862 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01430 - - gmx:100805024 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01430 3 27090288 27091862 Vimu3g01430 3 27090288 27091862 ECH
Vimu3g01430 3 27090288 27091862 Vimu2g01645 2 11710638 11712531 ECH
Vimu6g02684 6 23428114 23429082 Vimu3g01430 3 27090288 27091862 ECH
Vimu6g02684 6 23428114 23429082 Vimu3g01430 3 27090288 27091862 PCT
Vimu2g01645 2 11710638 11712531 Vimu3g01430 3 27090288 27091862 PCT