Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01645 ATGAGGTGCTTTCTACCATGTTTTCGCACTTCAAAACGCCGCAACCAATTGCGTTCTAAGGAGGTAAATCTCGCAGAGACCCATGTGGGGGAAGGAGCTGTTGAACCTCTTGCACGGCAGAAGACTGCTGTTGAAGAACTCATTGATTGCATAGCAGAATCAAAAATAAGAAATGAAGAGCAATCAAATAATAACAGTGTTGAAACCAAGGAGGAGCGTGAAAAAGGGGCAACAGCAGGGGAAGCACCTCAGATTGATCATGAAAGAGATGATGAGATCAGTGAAAGATTGCATCAGGAAGAGTCTTCGGAGTCACTGTTCTCTCTGTCTGTTTGTTCAAGAAAAAAAGTTTCAGATGCCGAAATAGTCGAGCCTGAAGTTAATAGTCCAATCCAATTGGTATGCACAAGAGATTTACCTGAAGCATTTGGGTCATCCCCAAATGCACCACTTCAAAATATTTCGTCTGTTCTGAGTCCAGTTGAAGAATTTACCCATGAAAATCCACCCAAGGAGAAGGACGATAAGGAAGGAGAAAAAGGGAAAGTGACTAACCCTGTTCTACAGTATAGGTATAGAGATTGCCCAGATGATGAATACGACGACGTTAATTTAGATACAAGTGATTTGGATTCTACGCTAGAAAATGACGATCCTCAGAGTGAGAAGAGAAAAAGGGGGGAAGAAGGCGCTGTTGTTAAACGAACATGGGTTCAAGAAGAGTCTTCGGAATCTCTGTTTTCTCTGTCTGCTGATTCTAGAATACGAATTTCATCAGCAGAAGCAGAGAATGAAGTGGACAGTCTAGTGTCAGCGAACATCACACAAAAAGAAGCACAAGGGAGGATTCCTGATGTTTCCTCAGTACTGAATCCAATCGAGAATGTTACGAAAGAGAGGGTAGTGAAAGCAAGAGAGGTGCATCCACTGAAGATCGATAAAGAAAACATCAACTTGGTAATGCAAGATGGTAACATACCCGTTAGTTCAGAGCCTGCTTTGAAGATGTCAAACCGCAAGGGTAGGCAAGAAATTGGGGTAGACACCAGCCTCTCTAGCTGGCTGGTTGAATCGGAAAGCACGCCTATTTCCATTAATAGTAACAGTTGTGTTGGAGAACATACACCAAAAGGAAGAAGAGGTTCACCGTGGAGTCACGAGGATAGGCCAATTTTGGGAGCATTAACAGTTGAAGAGATCAGGATGTATTCTTTATCTGCATCTTCGATAAGGTCTAGAAGCCGGAGTCCCGACGAGACACCCATCATCGGTACTGTTGGAAGCTACTGGACTCACACAGAACAGAGCATGGATTTGCAGTTCAACAAAAAAGGAAAGGATGTATCACCAAAGAGGAGTACAACGTCATTACAAACAAGACTAGAAGGTTCATTTGATGCTAGTGTATCAATGGGTTCAACGGCGTGA 1428 0.4314 MRCFLPCFRTSKRRNQLRSKEVNLAETHVGEGAVEPLARQKTAVEELIDCIAESKIRNEEQSNNNSVETKEEREKGATAGEAPQIDHERDDEISERLHQEESSESLFSLSVCSRKKVSDAEIVEPEVNSPIQLVCTRDLPEAFGSSPNAPLQNISSVLSPVEEFTHENPPKEKDDKEGEKGKVTNPVLQYRYRDCPDDEYDDVNLDTSDLDSTLENDDPQSEKRKRGEEGAVVKRTWVQEESSESLFSLSADSRIRISSAEAENEVDSLVSANITQKEAQGRIPDVSSVLNPIENVTKERVVKAREVHPLKIDKENINLVMQDGNIPVSSEPALKMSNRKGRQEIGVDTSLSSWLVESESTPISINSNSCVGEHTPKGRRGSPWSHEDRPILGALTVEEIRMYSLSASSIRSRSRSPDETPIIGTVGSYWTHTEQSMDLQFNKKGKDVSPKRSTTSLQTRLEGSFDASVSMGSTA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01645 475 MobiDBLite consensus disorder prediction 165 182 - -
Vimu2g01645 475 MobiDBLite consensus disorder prediction 58 103 - -
Vimu2g01645 475 MobiDBLite consensus disorder prediction 64 102 - -
Vimu2g01645 475 MobiDBLite consensus disorder prediction 216 235 - -
Vimu2g01645 475 MobiDBLite consensus disorder prediction 146 162 - -
Vimu2g01645 475 MobiDBLite consensus disorder prediction 140 242 - -
Vimu2g01645 475 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 57 180 IPR039300 GO:0007142
Vimu2g01645 475 MobiDBLite consensus disorder prediction 199 215 - -
Vimu2g01645 475 MobiDBLite consensus disorder prediction 366 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01645 Vimu-Chr2 11710638 11712531 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01645 - - pvu:PHAVU_006G104900g 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01430 3 27090288 27091862 Vimu2g01645 2 11710638 11712531 ECH
Vimu6g02684 6 23428114 23429082 Vimu2g01645 2 11710638 11712531 ECH
Vimu2g01645 2 11710638 11712531 Vimu2g01645 2 11710638 11712531 ECH
Vimu2g01645 2 11710638 11712531 Vimu3g01430 3 27090288 27091862 PCT