Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g02983 ATGGCGTCAGTGGATACGGATTCCTTCGTTGAAAAGATGGAAGAGAAGTTCCACGACAACAACTCCGATTCCGAATCATATTCCGATTCCGACGACGACCACGCCAATAAGCCTCCGCTCAAGGCTTCCGGATCCAACGTTTACCGCCTCTTCGGCCGAGAACAGCCCGTCCATAAGGTCCTCGGCGGTGGAAAACCTGCCGATATTTTGCTATGGAGGAATCGGAGAACCACAGGAATTGCACTTGGTGCTGGCACCGCCGTTTGGGTTTTCTTTCAGATGATGGAATACCACCTTATAACTTTCATTTGCCATTTATTGATTATGCTTCTCGGTGCACTTTTCTTGTGGTCCAATGCATCTGTCTTTATCCACAAGTCTCCACTGCACATCCCGCATGTAGTAATTCCCGAGGATTGCGTTCTTGAGGCTGCTTCTGCTATAAGAATTGAAATTAACCGAGCCTTCGTTCTTTTGCGGGAAATTGGAACAGGGAGAGATTTAAAGAAGTTTCTTAGCGTTATTGCTGTATTATGGGTTATTTCAGTTATTGGGGGTTGGTTCCACTTCTTGACCTTATTTTATCTATTCTATTTGTCACTGTTCACATTGCCACTGCTGTATGAGAAATACGAAGACCAGGTTGATGCAATGGGTGAGAAGGCAATGATTGAGATAAAAAAACAATATGCAGTGTTTGATGCTAAGGTTTTGAGCCAGATACCAATAGCAGGACTCAAAAAAGATTAG 750 0.4427 MASVDTDSFVEKMEEKFHDNNSDSESYSDSDDDHANKPPLKASGSNVYRLFGREQPVHKVLGGGKPADILLWRNRRTTGIALGAGTAVWVFFQMMEYHLITFICHLLIMLLGALFLWSNASVFIHKSPLHIPHVVIPEDCVLEAASAIRIEINRAFVLLREIGTGRDLKKFLSVIAVLWVISVIGGWFHFLTLFYLFYLSLFTLPLLYEKYEDQVDAMGEKAMIEIKKQYAVFDAKVLSQIPIAGLKKD 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g02983 249 PANTHER RETICULON 41 242 - -
Vimu3g02983 249 Pfam Reticulon 67 221 IPR003388 -
Vimu3g02983 249 ProSiteProfiles Reticulon domain profile. 66 249 IPR003388 -
Vimu3g02983 249 MobiDBLite consensus disorder prediction 15 41 - -
Vimu3g02983 249 MobiDBLite consensus disorder prediction 15 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g02983 Vimu-Chr3 43900807 43903299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g02983 - K20721 gmx:100790190 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00209 9 2606188 2607986 Vimu3g02983 3 43900807 43903299 ECH
Vimu11g04469 11 65766878 65768654 Vimu3g02983 3 43900807 43903299 ECH
Vimu3g02983 3 43900807 43903299 Vimu3g02983 3 43900807 43903299 ECH