Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04469 ATGGCGGAGCACCACGAGCACGAGGAGGCCAAGGGTGAATCCTTGTTGGACAAGATTTCCGGGAAGATCCACGACCATGATTCCTCGTCTTCTTCCGATTCCGACAACGAGAAAACCGGGCCCTCTGAGTCCCTGAAGTCAAAGGTTTTCAGGCTTTTCGGAAGGGAAAAACCCATTCACCATGTTCTTGGTGGCGGAAAACCGGCTGATGTTTTTCTGTGGAGAAATAAGAAGATATCAGCATCGACACTCGGAGTTGCTACAGCCATATGGATTCTGTTTGAATTGCTTGAATATCACCTCCTCACTTTGGTTTGCCACTTCGTAATACTTGCCCTCGCGGGTTTGTTCTTGTGGTCCAATGCATCCACTTTCATCAACAAGAGGCCGCCAAAGATCCCACAAGTGCACATTCCAGAGGAGCCTATTTTACAATTTGCCTCTGCTCTTAGAATTGAGATTAATCGGGCATTTTCAGTGTTAAGGGATATTGCATCCGGAAGGGATCTCAAGAAGTTCTTATCAGTGATTGCTGGATTATGGGTTTTCTCTATTCTGGGCAGTTGGGCGAACTTCTTGACGTTGTTCTACATAGCTTTTGTTTTGCTTCATACTGTGCCTGTGCTGTATGAGAAATACGAAGATCAAGTGGACTCTTTTGGTGAGAAGGCGTTTGCCGAGATTAAGAAGCAATATGCAGTGTTCGATGCGAAGGTTTTGAGCAAGATACCCAAAGGACCTTTGAAAGATAAAAAGAAAGATTGA 765 0.4523 MAEHHEHEEAKGESLLDKISGKIHDHDSSSSSDSDNEKTGPSESLKSKVFRLFGREKPIHHVLGGGKPADVFLWRNKKISASTLGVATAIWILFELLEYHLLTLVCHFVILALAGLFLWSNASTFINKRPPKIPQVHIPEEPILQFASALRIEINRAFSVLRDIASGRDLKKFLSVIAGLWVFSILGSWANFLTLFYIAFVLLHTVPVLYEKYEDQVDSFGEKAFAEIKKQYAVFDAKVLSKIPKGPLKDKKKD 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04469 254 ProSiteProfiles Reticulon domain profile. 68 254 IPR003388 -
Vimu11g04469 254 Pfam Reticulon 69 223 IPR003388 -
Vimu11g04469 254 MobiDBLite consensus disorder prediction 22 43 - -
Vimu11g04469 254 PANTHER RETICULON 36 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04469 Vimu-Chr11 65766878 65768654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04469 - - gmx:100779587 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04469 11 65766878 65768654 Vimu11g04469 11 65766878 65768654 ECH
Vimu11g04469 11 65766878 65768654 Vimu3g02983 3 43900807 43903299 ECH