Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu9g00209 ATGGCGGAAGAATCGGAGCACACTGCAGCACCGGCGACTGGGGAATCGTTGCTCGACAAGATCGCCGACAAGCTTCATGGCCATGGCCATGATTCTTCCTCTTCTTCGGATTCCGATTCCGACACAAAGGAATCTTCCTCGATCAAGGATACTTCCTCGATCAAGGATAAGGTTTTCCGTCTCTTCGGGAGGGAGAAGCCCGTTCACTCCGTCCTAGGCGGCGGAAAGCCTGCTGATGTGCTGTTGTGGAGGAACAAGAAGATATCTGCTAGTGTACTTGCTGTAGCAACAGCTGTTTGGATCTTTTTTGAGTTGCTTGAATATCATCTGCTTACGCTAGTCGGCCACATTTTGATTCTCTTGCTTGCGGTTTTGTTTTTGTGGTCCAATGCCCATACATTTATTCACAAGGCACCACCTCGCATCCCAGTTGTTCATCTTTCTGAAGAACCTTTTCTTCAATTTGCATCTGCATTGACAATTGAACTCAATCGCGGATTTGCTGCCTTGCATGCTATCGGTTCTGGAAGAGATTTGAAGACATTCCTCATCGTTATTGTTAGCACATGGATTCTATCAATTGTGGGAAGCTGGGTCAATTTCTTGACCTTGTTCTACATTGTCTTTGTTTTGTTGCATACGGTTCCTGTCATTTATGATAAGTATGAAGACAAGATAGACCCTCTGGCAGAGAAGGGATTGATCGAGTTCAAAAAACAGTATGCTGTGTTTGACGAGAAAGTATTGAGTAAGATCCCGAAAGGTCCATTGAAAGGCAAGTTAGCTTAG 789 0.4512 MAEESEHTAAPATGESLLDKIADKLHGHGHDSSSSSDSDSDTKESSSIKDTSSIKDKVFRLFGREKPVHSVLGGGKPADVLLWRNKKISASVLAVATAVWIFFELLEYHLLTLVGHILILLLAVLFLWSNAHTFIHKAPPRIPVVHLSEEPFLQFASALTIELNRGFAALHAIGSGRDLKTFLIVIVSTWILSIVGSWVNFLTLFYIVFVLLHTVPVIYDKYEDKIDPLAEKGLIEFKKQYAVFDEKVLSKIPKGPLKGKLA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu9g00209 262 Pfam Reticulon 78 232 IPR003388 -
Vimu9g00209 262 MobiDBLite consensus disorder prediction 25 49 - -
Vimu9g00209 262 ProSiteProfiles Reticulon domain profile. 77 262 IPR003388 -
Vimu9g00209 262 PANTHER RETICULON 46 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu9g00209 Vimu-Chr9 2606188 2607986 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu9g00209 - - gmx:100796111 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu9g00209 9 2606188 2607986 Vimu3g02983 3 43900807 43903299 ECH
Vimu9g00209 9 2606188 2607986 Vimu9g00209 9 2606188 2607986 ECH
Vimu6g00654 6 7685723 7689963 Vimu9g00209 9 2606188 2607986 PCT