Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01731 ATGGAAAAGGTTATCAGGTTGTCTGCAGAAAGGGGTGTGGTGGTTTTCACCAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTCCAAGAACTTCAAGTGGACCCTGTGGTCCATGAAATTGACAAAGACCCTGAAGGCAAGGAAATGGAGAAAGCTTTAACTAGGCTGGGTTGTTCAGCACCTGTTCCGGCGGTCTTCATCGGAGGGACGCTTGTGGGCTCCACCAATGAGCACCCAATCACTGGCCACCGTCGCCGTCACCAGTCTCCGTCGCCGTCAACCGTCGCCGTCACCGACCACCAAAAGGACGTCGCTCCTTCCTTCATTGTCGGTTTTCCAGACACTCTCAAGAACCACTTGGATTGCCTCTATTCCTTCATTTTTATTTTATTTTTTTTTCTTCTTCAATACAGGACGTCGCTCCTTCCTTTCTTTTTGCCTCCCATGGCCAACAACAACTCTTCATCTATTAGCAACCCTCACGAGCCATCAAAATCATTCACTTGCATCACCCTTAGCAGTGTCACCAAGCTTCTACCCTCAAATTACCTCACCTGGAAACTTCAAGTTGAAGCTCTTCTTGATGGCTATGATCTTCTTAAATATCCAGATGGATCCTTTCCTATGTCGCCAATGACGATCTCCACCACCGTTGTACCTCCAACTTCGAATCCTGCTTATCAAACCTGGCGTCGCCAGGACCTTCTTATATATGGTGCTCTCCTCACCACTCTCTCCCCTGAAGTGGCATCCTTGGTGTCTCAAACAACGACATCACATGATCTCTGGACTCTTCTCCAGCGCACCTATGCCAAGGCATCTCGCAGCCACCTCAAGCAGTTAAAGGAGCGTCTCCACACGGCGTCGAAAGGTAACCAATCCAACACAACCTACATGCATTCACTGAAGCAGAATACAAAGCCTTTGCTTTATCCTCGAAAAATTCAATCCAACATTGGACCATCCTAG 978 0.4816 MEKVIRLSAERGVVVFTKSSCCLCYAVNILFQELQVDPVVHEIDKDPEGKEMEKALTRLGCSAPVPAVFIGGTLVGSTNEHPITGHRRRHQSPSPSTVAVTDHQKDVAPSFIVGFPDTLKNHLDCLYSFIFILFFFLLQYRTSLLPFFLPPMANNNSSSISNPHEPSKSFTCITLSSVTKLLPSNYLTWKLQVEALLDGYDLLKYPDGSFPMSPMTISTTVVPPTSNPAYQTWRRQDLLIYGALLTTLSPEVASLVSQTTTSHDLWTLLQRTYAKASRSHLKQLKERLHTASKGNQSNTTYMHSLKQNTKPLLYPRKIQSNIGPS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01731 325 Gene3D Glutaredoxin 1 82 - -
Vimu3g01731 325 PANTHER GLUTAREDOXIN 1 80 IPR011905 -
Vimu3g01731 325 Pfam gag-polypeptide of LTR copia-type 233 307 - -
Vimu3g01731 325 Pfam Glutaredoxin 13 75 IPR002109 -
Vimu3g01731 325 ProSiteProfiles Glutaredoxin domain profile. 1 102 - -
Vimu3g01731 325 NCBIfam glutaredoxin-like family 5 80 IPR011905 -
Vimu3g01731 325 SUPERFAMILY Thioredoxin-like 2 79 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01731 Vimu-Chr3 31508790 31512457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g01731 1 80 Miscellaneous Gene Families AT4G15670 47.500 6.35e-24 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01731 K03676 - vra:106753757 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01731 3 31508790 31512457 Vimu3g01731 3 31508790 31512457 ECH
Vimu6g02171 6 19102477 19102943 Vimu3g01731 3 31508790 31512457 PCT
Vimu3g01731 3 31508790 31512457 Vimu6g02170 6 19100058 19100366 PCT