Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00252 ATGGACAGTAAAATTGTTGAAAGCATTGAGAGTCTTTCTTCCAAAGAAATGATTTCAATCTCATCTGAGGTGGTGGATTTTAGGGGTATAGGAAAAGTAGAGAAAGATTTTATTCCTTTATTAGAGGAAGTTTGTTCACTGTATCCTTCACTTATTGATACCAAGAAAAAGAGAAGTCAAAGATTTATGGAATGGGCTTTTACAGCACTTGGTAGAGTTCTTCATTTTCTCAACACTAAAAAGGAGGGAGAAATGGATGATGATGCTTGCAATTATCTCCAAACTTTGTGGGAAGAACTTGAGATATGTGGATTCGATTTGTCATGGCTGAAACCTCGTATTGATAGAGCTCTTGAGATGAAAAAGTTGGAGAAGGATATGACTATTTTAGAAATGGAAGCAAAGACTTTAATGACAAAGATGATTGAAGCAAAGGTAAATCTGGAAATAACAAGGTTGGTGAAAGTAAAAGAAAGTTTTGAAGAATGCGATTTGGATGATGAACTCAGATATGACTTGGTGAGGAGGATGTCCCATCAGGAGATGCTGGAAGATGCCTTTGAGATAAGCGCTGTACGTGCTACTGAGACAGTTAAAGATAAAGTGGAGCACTTGAAGGAAAAATTGGCTATGGTGCAGTCCGATTTGGACGAAGCGTTAAAGGTTAATTCTAAGTTGAACATTAAGCTACAGGATCTGACCATTGCTCATGCCGACTGCGAGAAGAAACAAAAGGATGTGGCTACCCGATTTTCTGAGACGGTGAAGCTTTCAATTGAAGCTGGTCGTAAACTTCAAAAAAATAACGAAGATCTAACTTTAGAATGTCAGATTATGAAAAAAACGATTAAAGATCTTGTCGCACATAATAACAAGCTCATCCAAGAGAAGGCTAAGTTAGTCAGGGAGAGGAACGCTCGTTCTGCCGAAGTAGATGGTTTGCTGGGTTGTTAA 954 0.3816 MDSKIVESIESLSSKEMISISSEVVDFRGIGKVEKDFIPLLEEVCSLYPSLIDTKKKRSQRFMEWAFTALGRVLHFLNTKKEGEMDDDACNYLQTLWEELEICGFDLSWLKPRIDRALEMKKLEKDMTILEMEAKTLMTKMIEAKVNLEITRLVKVKESFEECDLDDELRYDLVRRMSHQEMLEDAFEISAVRATETVKDKVEHLKEKLAMVQSDLDEALKVNSKLNIKLQDLTIAHADCEKKQKDVATRFSETVKLSIEAGRKLQKNNEDLTLECQIMKKTIKDLVAHNNKLIQEKAKLVRERNARSAEVDGLLGC 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00252 317 Coils Coil 202 222 - -
Vimu3g00252 317 Coils Coil 283 303 - -
Vimu3g00252 317 Coils Coil 120 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00252 Vimu-Chr3 2266911 2268032 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00252 - - vra:111242252 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00252 3 2266911 2268032 Vimu3g00769 3 8554540 8572147 ECH
Vimu3g00252 3 2266911 2268032 Vimu3g00252 3 2266911 2268032 ECH
Vimu3g00252 3 2266911 2268032 Vimu1g00709 1 4563053 4576174 ECH