Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04113 TTTGTTGATCGTCAGGAAGAGCTCATCACTCTTTCTAGTGATCAGGTACCTGCTGCCATTCTGGTAATTGAACAGAGCAATCTTCATCAGACAAAGTCACTGGATTTCAAACTTTGTGATATAGTGAGTATGTCTTCTGCAACCAAGGGTGATAGGAAGACTGCAATTGATGTGGCGTCGTGGATGTTCAATATAGTCACATCTGTGGGGATAATCCTTGTGAACAAAGCCCTCATGGCTACATATGGTTTCAGCTTTGCAACAACGTTAACTGGTTTGCATTTTGCCACAACTACCTTGCTGACACTCTTTCTTAAGTGGCTGGGATATATCCAAACCTCTCATCTTCCCTTACCCGATCTTATCAAATTTGTCTTATTTGCAAATTTCTCTATCGTCGGAATGAATGTGAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGTATGATTCCGGTATCTTGTTTCCTGGAAGTTATCTTGGACAACGTACGATATTCAAGGGACACAAAGCTTAGCATTTCTCTAGTTCTCCTTGGTGTAGCTGTATGTACTGTCACTGATGTGAGCGTCAATGCTAAGGGTTTCATAGCTGCTGCAGTTGCAGTTTGGAGCACCTCACTGCAGCAGTATTATGTGCATTTTCTTCAGCGGAAGTATTCTCTTGGATCGTTTAACTTGTTAGGTCACACTGCACCAGTACAAGCCGCAAGTTTACTGCTAGTAGGTCCCGTTGTGGACTATTGGTTGACAAACAAACGAGTGGATGCCTACAACTATGGTTTGACATCCACTTTGTTGATCATTATCTCTTGCACCATAGCAGTAGGGACAAACCTGAGCCAGTTCATCTGCATTGGCAGGTTCACAGCCGTATCCTTCCAAGTGCTTGGTCACATGAAGACAATTCTGGTACTGACCTTAGGATTTGTTTTCTTTGGAAAAGAAGGTCTGAATTTACAAGTGATTCTGGGCATGCTCATTGCAATAGCGGGAATGATATGGTATGGCAATGCATCTTCCAAGCCAGAAGGGAAGGAGCGTGTCAGTTTACCCGTTAGTTCTACCCCCAAGACACAAGACTATAATGTACTATCAGTATCTTCTGAAACAGATCATTAA 1134 0.4259 FVDRQEELITLSSDQVPAAILVIEQSNLHQTKSLDFKLCDIVSMSSATKGDRKTAIDVASWMFNIVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTLFLKWLGYIQTSHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTSLQQYYVHFLQRKYSLGSFNLLGHTAPVQAASLLLVGPVVDYWLTNKRVDAYNYGLTSTLLIIISCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLTLGFVFFGKEGLNLQVILGMLIAIAGMIWYGNASSKPEGKERVSLPVSSTPKTQDYNVLSVSSETDH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04113 377 PANTHER SOLUTE CARRIER FAMILY 35 59 344 - -
Vimu11g04113 377 Pfam Triose-phosphate Transporter family 66 340 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04113 Vimu-Chr11 62791944 62795455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04113 4 346 Organic Solute Cotransporters AT3G10290 25.762 7.81e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04113 K26224 - gmx:100814890 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04113 11 62791944 62795455 Vimu11g04113 11 62791944 62795455 ECH
Vimu11g04113 11 62791944 62795455 Vimu10g01943 10 28122443 28127073 ECH
Vimu11g04113 11 62791944 62795455 Vimu10g01813 10 25706027 25709050 PCT