Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01943 ATGTCTTCTGTAAGCAAGGGTGATCGCAAGGCTTCTCTTGATGCAGCATCATGGTTGTTCAATGTGGTCACGTCTGTGGGAATAATCCTGGTGAATAAGGCCCTAATGGCTACATATGGTTTTAGTTTTGCTACTACTTTAACTGGTCTGCATTTTGCCACGACAACTTTGTTGACACTCATTCTTAAATCGCTGGGATATATTCAGACCTCTCATCTTCCATTATCTGATATTATCAAATTTGTCTTATTTGCAAATTTCTCCATCGTTGGAATGAATGTGAGTTTAATGTGGAATTCTGTTGGTTTTTATCAGATTGCTAAGCTGAGCATGATTCCAGTATCTTGTTTTCTGGAGGTTGTCTTGGACAATGTACGATATTCAAGGGACACAAAGCTTAGTATTGTTTTGGTTTTGCTTGGTGTTGCTGTCTGTACAGTCACCGATGTCAGTGTTAATGCAAAAGGTTTTATTGCTGCTTTGATAGCAGTTTGGAGCACAGCCCTGCAACAGTATTATGTGCATTATCTTCAGAGGAAGTATTCTATTGGATCATTTAACTTGTTGGGCCACACAGCACCAGCACAGGCAGGAAGTTTACTCCTAGTAGGCCCCTTTCTGGACTATTGGTTGACAGGCAAACGAGTTGATGCCTACGGATATGGCTTGACATCAACTTTGTTCATCATTCTGTCTTGCACCATTGCAGTAGGGACAAACCTCAGTCAGTTCATCTGCATCGGTAGGTTCACGGCTGTATCATTCCAAGTCCTGGGTCACATGAAGACTATTTTGGTCCTAATCCTGGGCTTCATTTTCTTTGGAAAAGAGGGTCTCAATCTACATGTTGTTCTGGGTATGATCGTTGCGATAGCAGGAATGGTCTGGTATGGCAATGCTTCTTCTAAGCCAGGGGGGAAAGAGCGTCGTAGCTTTTCTCTTCCCAAAACACAAGATTATAGTTCACTACCTGTGTCCTCTGAACCAGACACGAAGGCATAG 1002 0.4242 MSSVSKGDRKASLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTLILKSLGYIQTSHLPLSDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSIVLVLLGVAVCTVTDVSVNAKGFIAALIAVWSTALQQYYVHYLQRKYSIGSFNLLGHTAPAQAGSLLLVGPFLDYWLTGKRVDAYGYGLTSTLFIILSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLILGFIFFGKEGLNLHVVLGMIVAIAGMVWYGNASSKPGGKERRSFSLPKTQDYSSLPVSSEPDTKA 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01943 333 MobiDBLite consensus disorder prediction 303 333 - -
Vimu10g01943 333 Pfam Triose-phosphate Transporter family 24 297 IPR004853 -
Vimu10g01943 333 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Vimu10g01943 333 MobiDBLite consensus disorder prediction 315 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01943 Vimu-Chr10 28122443 28127073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01943 18 298 Organic Solute Cotransporters AT1G77610 26.910 5.96e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01943 K26224 - gmx:100800306 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01943 10 28122443 28127073 Vimu10g01943 10 28122443 28127073 ECH
Vimu11g04113 11 62791944 62795455 Vimu10g01943 10 28122443 28127073 ECH