Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01813 ATGCGCAAGGTTGTTTGGTTGTTCTCTCCACCACACAAACAAAATGCCTTTGTCTTTCTCTCTCACTTCTTTTGGGGCTGTGAGGAAAGTGTTGGGGAATGTTATAACAGGCAAGTATTCTCCCCTTGCATTCAAGCTTCTTCTTTTGCACTCACACAAACTCTTAATTTGAATATTGTTAAACCAATGGGTGGAAATTGGCACTTGGCAAGAAGAGGAGAAAGACTTGTATCATTTAAAGGTAGTGTAAGGCTTGCACATACAACGTGCCGAATCTCTGCCCCTAGGACCTTCCCGAGAAATGAAGAAAAGGCCTTGTCTAATATCTCAAGGGATAAGAAGACAGTTCCAGAAGCAGATCCTCCCAGTATCAAAGATGTTCATCTTTTGTATGAATTTTTGGACCAGAGTACCAAGCTCACGGTATTGACTGGAGCTGGAATCAGTACAGAGTGTGGCATCCCCGACTACAGAAGCCCCAATGGAGCTTATAGTTCTGGTTTCAAACCGATAACCCATCAGGAGTTTCTCCGTTCAAGTCGAGCTCAGAGGAGATATTGGGCAAGGAGCTATGCTGGGTGGAGACGATTTACAGAGGCACAACCATCTGCTGCCCATACTGCTTTGGCAACACTAGATAAAGCTGGCCGAATTGATTTTATGATTACCCAAAATGTTGATAGGCTGCATCATCGTGCTGGTAGCAACCCATTAGAAATACATGGGACTGTATACACTGTAATTTGTATAGATTGTGGATATTCCTTTTGCCGGAGCTTATTTCAAGACCAGTTGAAAGCCCTTAATCCAAAGGTTAGGATTTGCATCTAA 831 0.432 MRKVVWLFSPPHKQNAFVFLSHFFWGCEESVGECYNRQVFSPCIQASSFALTQTLNLNIVKPMGGNWHLARRGERLVSFKGSVRLAHTTCRISAPRTFPRNEEKALSNISRDKKTVPEADPPSIKDVHLLYEFLDQSTKLTVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQEFLRSSRAQRRYWARSYAGWRRFTEAQPSAAHTALATLDKAGRIDFMITQNVDRLHHRAGSNPLEIHGTVYTVICIDCGYSFCRSLFQDQLKALNPKVRICI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01813 276 Pfam Sir2 family 145 270 IPR003000 GO:0070403
Vimu10g01813 276 PANTHER NAD-DEPENDENT HISTONE DEACETYLASE HST4 126 275 - -
Vimu10g01813 276 ProSiteProfiles Sirtuin catalytic domain profile. 117 276 IPR026590 -
Vimu10g01813 276 SUPERFAMILY DHS-like NAD/FAD-binding domain 113 275 IPR029035 -
Vimu10g01813 276 Gene3D - 124 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01813 Vimu-Chr10 25706027 25709050 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01813 K11414 - gmx:100815194 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04113 11 62791944 62795455 Vimu10g01813 10 25706027 25709050 PCT