Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02698 ATGGACAAGACGAAGTTGAGAGAACAAGCGCTCTCCATACGAACTTCACTCTTTGATCAGGGATTCCTTGACGAGCAATTCATTCAGTTAGAAGAACTGCAAGACGATGCTAATCCCAATTTTGTTGAAGAAATTGTGACCCTTTTCTACAGTGACTCTGTAAGACTGATCTACAACATAGAAAGAGGACTGATGACTAACCCTCCAAATTTCACCAAGCTAGAGGATTTCATGCATCAATTCAAGGGTAGTTGCTCAAGCATTGGAGCAAAGAAGGTGAAGACTGAATGTAGCAGATTCAGTGAATACTGCGCAGCTGAAAACTTTGAGGGGTAA 336 0.4167 MDKTKLREQALSIRTSLFDQGFLDEQFIQLEELQDDANPNFVEEIVTLFYSDSVRLIYNIERGLMTNPPNFTKLEDFMHQFKGSCSSIGAKKVKTECSRFSEYCAAENFEG 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02698 111 FunFam Histidine-containing phosphotransfer protein 1 1 111 - -
Vimu10g02698 111 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 7 111 IPR045871 GO:0000160|GO:0009927|GO:0043424
Vimu10g02698 111 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 111 IPR008207 GO:0000160
Vimu10g02698 111 Pfam Hpt domain 44 104 IPR008207 GO:0000160
Vimu10g02698 111 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 111 IPR036641 GO:0000160
Vimu10g02698 111 Gene3D HPT domain 1 111 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02698 Vimu-Chr10 38400289 38403263 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02698 K14490 - gmx:100780856 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02698 10 38400289 38403263 Vimu10g02698 10 38400289 38403263 ECH
Vimu11g02888 11 48748869 48750507 Vimu10g02698 10 38400289 38403263 ECH
Vimu4g00274 4 1903009 1904066 Vimu10g02698 10 38400289 38403263 ECH