Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02577 TATCGATCAGCAATTAACATTGTTGAAGTTTGGCAACAGTGGAGAAGAGGAAGAAGAAGATTTAGAACTGCAGATATGGCCGAAGGAAGCGAAGGAGAGAAAAACAGAACCATGAAACGGATTCTTCTCATAATAAACTGTCTCTTACTCGCCGTCGGAACCGCCGGCGGCCCCCTCGTTATGCGTCTCTACTTCCTCCGTGGCGGCAACCGTGTCTGGCTTTCCAGCTTCCTCGAAACAGCCGGCTTCCCCTTCATGCTACTCCCCCTCGCCGTCTCTTACTTCCGCCGCCGCGCAGCGGCTGCAGCGGCGGGAACTGCTAAACCCAGTCCGGTCTCGATGAAACCCCCTCTCCTCGCGGCCTCCGTCTTCATCGGAGTCCTCACCGGCCTCGACGACTACCTCTACGCCTACGGCGTGGCGCGCCTCCCCGTGTCCACGTCATCACTCATCATCGCCACACAACTCGGCTTCACCGCGCTGTTCGCGTTCCTGCTGGTGCGCCAGAAGTTCACTTCGTACTCCGTGAACGCCGTCGTTTTGCTTACAGTCGGCGCCGGAGTTCTGGCGCTCCACAGCAGCGGAGACCGCCCCCCGGGCGAGTCCGTGAAGGCCTACGTGATGGGGTTCGTGATGACAGTAATCGCTGCAGCATTGTACGGCTTCGTGTTACCCATGGTGGAGTTGGTGTACAAAAAAACCAAACAACCTATTACCTATTCCCTTGTCATGGAGATTCAGTTCGTGATGTGCTTCTCCGCCACTCTCTTCTGCCTCATCGGCATGATCATTAACAACGACTTTAAGGTGATTCCGAGAGAAGCTAAAACATTCAAGCACGGGGAAGTTAACTACTACGTTGTGTTGGTGGGGAGTGCAATAATATGGCAAGCTTTTTTCTTGGGAGCTATTGGGGTTATTTTTTGTGCGTCGTCTTTGTTTTCTGGTATTTTGATTGCAGTCTTGCTACCCGTAACGGAAGTGTTGGCGGTTATTTTCTACAAAGAGAAGTTTCAAGCTGAGAAGGGTGTTTCTCTGTTGCTGTCGCTCTGGGGCATGGTGTCTTACTTCTATGGGGAGATTAAACATGAGAAGAAGATGAAGAAAAAGAAGAACAGTGACATGGAAGCAACAGAGATGCCTGAATTGGGAATGATTGAAAAATGA 1167 0.5167 YRSAINIVEVWQQWRRGRRRFRTADMAEGSEGEKNRTMKRILLIINCLLLAVGTAGGPLVMRLYFLRGGNRVWLSSFLETAGFPFMLLPLAVSYFRRRAAAAAAGTAKPSPVSMKPPLLAASVFIGVLTGLDDYLYAYGVARLPVSTSSLIIATQLGFTALFAFLLVRQKFTSYSVNAVVLLTVGAGVLALHSSGDRPPGESVKAYVMGFVMTVIAAALYGFVLPMVELVYKKTKQPITYSLVMEIQFVMCFSATLFCLIGMIINNDFKVIPREAKTFKHGEVNYYVVLVGSAIIWQAFFLGAIGVIFCASSLFSGILIAVLLPVTEVLAVIFYKEKFQAEKGVSLLLSLWGMVSYFYGEIKHEKKMKKKKNSDMEATEMPELGMIEK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02577 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 109 194 - -
Vimu10g02577 388 PANTHER OS09G0467300 PROTEIN-RELATED 32 373 IPR030182 GO:0015211|GO:0016020
Vimu10g02577 388 Pfam Purine nucleobase transmembrane transport 41 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02577 Vimu-Chr10 37126812 37128054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02577 53 383 Organic Solute Cotransporters AT1G28230 63.690 4.28e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02577 - - gmx:100803818 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02577 10 37126812 37128054 Vimu10g02577 10 37126812 37128054 ECH
Vimu1g01947 1 25659902 25661417 Vimu10g02577 10 37126812 37128054 PCT
Vimu10g02577 10 37126812 37128054 Vimu1g00485 1 2949798 2953740 PCT