Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00485 ATGAAGGCGATTGAAAGTCCTTCAACCTTAGATGATCAACAATGGCTAACGTATTGGGTTTTATACTCCTTCTTGACCCTCTTTGAGCTTTCCACTCATAAGATCCTATGTTGGTTTCCAATTTGGGGATACCTGAAGCTTGTGTTTTGCATCTGGTTGGTGCTGCCAATGTTCAATGGAGCGGCTTACATATATGAAAAATATGTGAGGCAATACATAAAGAATATTGGAAGCTACAGAAGTTCCAATTATCCTGAAGAGTACAAGAAGGTCCTTCACATGATGACCTTCGATGCAAGGAAAGCAGTTGAACGCTATATCGATAGAAATGGCCCTGAAGCTTTTGAGAGAGTAATCAGAGCGGCTGAAAAAGAAGCGAAGAAGCGCTGA 390 0.4128 MKAIESPSTLDDQQWLTYWVLYSFLTLFELSTHKILCWFPIWGYLKLVFCIWLVLPMFNGAAYIYEKYVRQYIKNIGSYRSSNYPEEYKKVLHMMTFDARKAVERYIDRNGPEAFERVIRAAEKEAKKR 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00485 129 PANTHER HVA22-LIKE PROTEINS 2 105 IPR004345 -
Vimu1g00485 129 Pfam TB2/DP1, HVA22 family 1 72 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00485 Vimu-Chr1 2949798 2953740 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00485 K17279 - gmx:100779435 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g02965 2 28656599 28657364 Vimu1g00485 1 2949798 2953740 PCT
Vimu10g02577 10 37126812 37128054 Vimu1g00485 1 2949798 2953740 PCT