Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03436 ATGGATAGGGTAAATGATTTATCATCAAAGAAAGCCGCGGTTATATTTACAAAGAGTTCATGTTACATGTGTCATAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGTCCTGCAGTATATGAACTGGACAATGATTCATCATATGGTAAGGAAATGGAAAGGGCTTTGAAGGGTAATTTTGGATGTAACCCTTCAGTTCCAGCAGTGTTTATAGGTGGAAAATTTGTAGGATCTTCAAAAGATGTTATATCTCTACATGTTGATGGATCTCTCAAACAAATGCTTATGGATGCAAAAGCCATTTGGTTATAA 315 0.3619 MDRVNDLSSKKAAVIFTKSSCYMCHSIKQLFYELGASPAVYELDNDSSYGKEMERALKGNFGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQMLMDAKAIWL 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03436 104 Gene3D Glutaredoxin 1 102 - -
Vifa5g03436 104 SUPERFAMILY Thioredoxin-like 1 103 IPR036249 -
Vifa5g03436 104 CDD GRX_GRXh_1_2_like 12 95 - -
Vifa5g03436 104 NCBIfam glutaredoxin-like family 4 104 IPR011905 -
Vifa5g03436 104 PRINTS Glutaredoxin signature 60 73 IPR014025 -
Vifa5g03436 104 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Vifa5g03436 104 PRINTS Glutaredoxin signature 74 87 IPR014025 -
Vifa5g03436 104 PANTHER GLUTAREDOXIN 1 104 IPR011905 -
Vifa5g03436 104 ProSiteProfiles Glutaredoxin domain profile. 1 103 - -
Vifa5g03436 104 Pfam Glutaredoxin 14 77 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03436 Vifa-Chr5 1128492322 1128492636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03436 1 104 Miscellaneous Gene Families AT4G15670 49.038 1.39e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03436 K03676 - gmx:100788094 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03436 5 1128492322 1128492636 Vifa5g03436 5 1128492322 1128492636 ECH
Vifa5g03436 5 1128492322 1128492636 Vifa3g02245 3 564221023 564221331 PCT
Vifa3g02259 3 568623201 568623500 Vifa5g03436 5 1128492322 1128492636 PCT