Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02259 ATGGAGAAAGTGATGAGGTTGGCCACAGAAAAAGGTGTGGTGATTTTCACAAAGAGCTCTTGTTGTCTATGCTATGCAGTGAACATTCTGTTTCGAGAAGTTGGAGTGTATCCTGTGATTCATGAAATTGACAAAGACCCTGAAGGGAAAGAAATGGAGAAAGCTATAACAAAGTTGGGTTGTAATGCACCTGTTCCTGCAGTTTTCATTGGAGGAAGGCTTGTGGGTTCCACCAATGAAGTAATGTCCCTCCACCTTAGTGGTTCACTCGTTCCATTGCTCAGGCCATACCAAATTTAA 300 0.4267 MEKVMRLATEKGVVIFTKSSCCLCYAVNILFREVGVYPVIHEIDKDPEGKEMEKAITKLGCNAPVPAVFIGGRLVGSTNEVMSLHLSGSLVPLLRPYQI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02259 99 FunFam Glutaredoxin family protein 1 99 - -
Vifa3g02259 99 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Vifa3g02259 99 Gene3D Glutaredoxin 1 99 - -
Vifa3g02259 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
Vifa3g02259 99 PANTHER GLUTAREDOXIN 1 95 IPR011905 -
Vifa3g02259 99 NCBIfam glutaredoxin-like family 4 97 IPR011905 -
Vifa3g02259 99 CDD GRX_GRXh_1_2_like 13 93 - -
Vifa3g02259 99 Pfam Glutaredoxin 13 75 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02259 Vifa-Chr3 568623201 568623500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02259 1 95 Miscellaneous Gene Families AT4G15670 51.579 2.22e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02259 K03676 - tcc:18613485 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02259 3 568623201 568623500 Vifa3g02259 3 568623201 568623500 ECH
Vifa5g03435 5 1128490354 1128490659 Vifa3g02259 3 568623201 568623500 PCT
Vifa3g02259 3 568623201 568623500 Vifa5g03436 5 1128492322 1128492636 PCT