Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02697 ATGGATTCAATTCAACAATTTATACAGACATGTAACAATGAAAACAGCTGCAACTTCATGAATACTATAAGCAACAACAACACAAGCTTAACAACAACAACAACAACAACAGCAAGTGGAAGCTCTTCTTCATCTGCAGCTTCAACCATAACATCCAACACACCAAACAGTAGCAGCCGGTATGAGAATCAGAAACGCCGTGACTGGAACACTTTCGGTCAGTACCTCAAGAATCATCGTCCTCCTCTTTCTCTCTCTAGATGCAGCGGTGCACATGTGCTTGAATTTCTCAGGTATTTGGATCAATTTGGGAAAACAAAAGTTCACACACCAATTTGTCCATTTTATGGGCATCCAAACCCTCCAGCACCATGTCCATGTCCTCTAAGGCAAGCATGGGGAAGCCTAGATGCACTGATAGGCCGTCTTCGAGCGGCCTTTGAAGAAAACGGAGGAAAACCAGAAACAAATCCATTTGGTGCTCGAGCCGTGAGGCTTTACCTTCGCGAAGTTCGCGATCTTCAATCCAAAGCAAGAGGGATTAGTTATGAGAAAAAGAAGAGAAAACGTCCACCACCACCACCGCGGCCACAGCAACAAGTTCCACCACCACAAGGTGCAAGTGCAGCTCATTAG 636 0.4513 MDSIQQFIQTCNNENSCNFMNTISNNNTSLTTTTTTTASGSSSSSAASTITSNTPNSSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPPPRPQQQVPPPQGASAAH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02697 211 PANTHER PROTEIN G1-LIKE2 35 196 IPR040222 -
Vifa5g02697 211 MobiDBLite consensus disorder prediction 33 64 - -
Vifa5g02697 211 MobiDBLite consensus disorder prediction 33 60 - -
Vifa5g02697 211 Pfam ALOG domain 51 173 IPR006936 -
Vifa5g02697 211 ProSiteProfiles ALOG domain profile. 60 187 IPR006936 -
Vifa5g02697 211 MobiDBLite consensus disorder prediction 177 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02697 Vifa-Chr5 898424106 898425012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02697 - - ccaj:109797167 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02697 5 898424106 898425012 Vifa5g02697 5 898424106 898425012 ECH
Vifa5g02697 5 898424106 898425012 Vifa3g00236 3 22148217 22148852 PCT
Vifa3g01291 3 333864047 333864977 Vifa5g02697 5 898424106 898425012 PCT