Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01291 ATGGATTCAATTCAAGATTTTATGGACTCATGTAACTCTGACAACACTTGCAGCCTCACCAACAGCACCATCACCACCAACGACACCACCACCATCCACAACACCACCACCTTAGTTTGCAGCTCTTCTCCTTCTGGTTCTACCACCACCAGCAGCCGCTATGAGAACCAGAAACGCCGTGACTGGAACACTTTCGGACAGTACCTCAAGAATCACCGCCCTCCTCTCTCCCTCTCCAGATGCAGCGGTGCACATGTTCTTGAATTTCTCCGCTACTTGGATCAATTTGGCAAAACAAAAGTGCACACACCAATTTGTCCTTTCTATGGACATCCAAATCCTCCAGCACCATGTCCATGTCCATTAAGACAAGCTTGGGGAAGCCTCGATGCACTGATAGGTCGTTTAAGAGCAGCTTTTGAAGAAAATGGAGGAAAACCAGATACAAATCCATTTGGTGCAAGAGCTGTTAGGCTTTATCTTCGCGAAGTTCGTGATCTTCAATCGAAAGCAAGAGGTATTAGTTACGAGAAGAAGAAACGAAAGCGTCCACCGCAACAACAGCATCAGCAGCATCAACAACATCAGCATCAACAGCTTCAACAATTACCAATGCAATTGCCTCTTCATCTTTGTCACCATCAACATCAGCTTCCACCTCCAGGTGCAACTCAATAA 678 0.4617 MDSIQDFMDSCNSDNTCSLTNSTITTNDTTTIHNTTTLVCSSSPSGSTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPDTNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQHQQHQQHQHQQLQQLPMQLPLHLCHHQHQLPPPGATQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01291 225 Pfam ALOG domain 47 166 IPR006936 -
Vifa3g01291 225 MobiDBLite consensus disorder prediction 171 201 - -
Vifa3g01291 225 PANTHER PROTEIN G1-LIKE2 35 198 IPR040222 -
Vifa3g01291 225 ProSiteProfiles ALOG domain profile. 53 180 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01291 Vifa-Chr3 333864047 333864977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01291 - - gmx:100803605 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01291 3 333864047 333864977 Vifa5g02697 5 898424106 898425012 PCT