Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00236 ATGATGAATTCTCTTCAAGAATTTGAATCTTCATCAAACAATAAAGACATGATCAACACCAACCCTATGAGCATAATAACATCCTCATCCTCATCCTCATCATCCATGATGACAATATCATCAACTACATCAGCATCATCCTCAACAACATCACCATCTTCCCCATCAGCAACCACAACAACACCAAGTAGATACGAGAATCAAAAGAGAAGAGACTGGAACACTTTTGGACAATACCTAAGAAACCACAGACCACCACTCTCACTCTCACGTTGTAGTGGTGCTCATGTCCTTGAATTCTTGCGCTATCTTGACCAGTTTGGAAAAACAAAAGTCCACACACAGATTTGTCCCTTTTTTGGTCATCCAAATCCACCTGCACCTTGTCCTTGTCCTCTACGCCAAGCCTGGGGGAGTCTTGATGCACTGATAGGAAGACTTAGAGCTGCTTTTGAAGAGAATGGTGGGAAACCAGAAGCTAATCCTTTCGGTGCTCGTGCTGTTAGGCTTTATCTTCGTGAAGTTAGGGATTCACAGGCTAAAGCTAGAGGTATTAGTTATGAGAAAAAGAAGAGAAAGCGTCCGCCTCAGCCGCCACCACCACCAAATGCAACTGGAACTGATCTTGATCACTAA 636 0.4324 MMNSLQEFESSSNNKDMINTNPMSIITSSSSSSSSMMTISSTTSASSSTTSPSSPSATTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTQICPFFGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPPPPNATGTDLDH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00236 211 PANTHER PROTEIN G1-LIKE2 36 197 IPR040222 -
Vifa3g00236 211 Pfam ALOG domain 58 177 IPR006936 -
Vifa3g00236 211 MobiDBLite consensus disorder prediction 1 70 - -
Vifa3g00236 211 MobiDBLite consensus disorder prediction 1 64 - -
Vifa3g00236 211 MobiDBLite consensus disorder prediction 178 211 - -
Vifa3g00236 211 MobiDBLite consensus disorder prediction 178 195 - -
Vifa3g00236 211 ProSiteProfiles ALOG domain profile. 64 191 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00236 Vifa-Chr3 22148217 22148852 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00236 - - cave:132178710 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02697 5 898424106 898425012 Vifa3g00236 3 22148217 22148852 PCT