Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02432 ATGCAGAGGCCTCCGCCAGAAGATTTTCTGTTGAAAGAGACCAAACCCCACCTTGGTGGTGGTAAGGTTTCTGGAGATAAGCTTACTAGTACGTATGATCTTGTTGAGCAAATGCAGTATCTTTATGTGAGGGTTGTGAAGGCTAAGGAGTTACCTTCAAAGGATGTTACTGGAAGTTGTGACCCTTATGTTGAGGTTAAGCTTGGTAACTATAAGGGGACTACTAGGCATTTTGAGAAGAAGACGAATCCGGAGTGGAGTCAGGTTTTTGCGTTTTCGAAGGATCGGATTCAGGCTTCTGTTCTTGAGGTTACTGTGAAGGATAAGGATGTTGTGAAGGATGATTTTATTGGGCGGGTTTGGTTTGATCTTAATGAGGTTCCGAAGAGGGTTCCTCCGGACAGTCCTCTTGCGCCGCAATGGTATAGGTTGGAGGATAGGAAGGGGGATAAGGCGAAAGGGGAACTGATGCTGGCTGTTTGGATGGGTACACAGGCTGATGAAGCCTTTCCTGAGGCGTGGCATTCGGATGCAGCCACTGTTAGTGGGACTGATGCTCTTGCTAACATTAGGTCGAAGGTTTATCTTTCGCCTAAGCTTTGGTATTTGAGGGTTAATGTGATTGAGGCACAGGACTTGCAGCCGTCTGACAAGGGAAGATTTCCGGAGGTTTATGTGAAGGCTATTTTGGGAAATCAGACATTGAGGACTAGAATATCTCAGAGCAGGAGTATCAATCCAATGTGGAATGAGGATTTGATGTTTGTGGCAGCAGAACCATTTGAGGAGCCACTGATTTTGAGTGTGGAAGATAGGGTTGCACCTAACAAAGAGGAACTGCTAGGGAAGTGTGCTATTCCTTTACACATGATGGACCGCAGACTTGATCACAAACCTGTGAACACTAGGTGGTTCAATATTGAAAAGCATGTTGTTATTATGGAAGGGGATAAGAAGAAGGAAATCAAGTTTTCGAGCAGGATTCATATGAGGGTCTGTTTAGAAGGTGGTTATCATGTTTTGGATGAATCTACTCACTACAGTAGTGATCTTCGGCCAACTGCGAAACAGCTGTGGAAGTCCAATATTGGAGTTCTTGAAGTTGGGATATTGAATGCTTCAGGTTTGATGCCGATGAAAACAAGTAACGGTAGGGGGACAACAGATGCTTATTGTGTGGCTAAGTATGGACAGAAGTGGGTGCGGACGAGAACCATCATCGATAGCTTTGCACCCAGATGGAACGAGCAGTATACTTGGGAGGTTTTTGATCCGTGCACTGTCATTACAATAGGTGTATTTGATAATTGTCATTTGCACGGTGGTGGTGATAAACCTGGAGGACAGAGAGATTCAAAAATCGGGAAGGTAAGAATCCGTCTTTCCACACTTGAGACTGACCGAGTATACACACATTCCTATCCTCTTCTAGTTCTTCATCCAACTGGGGTGAAGAAAATGGGAGAAATTCAATTGGCTGTAAGGTTTACTTGCTCGTCTTTGCTTAACATGATGCACATGTATTCAAATCCTTTGTTGCCTAAGATGCATTACATTCATCCGTTAACCGTAAGCCAGCTCGACAGTCTGAGGCATCAAGCCACTCAGATTGTTTCAATGAGACTGAGTCGCGCTGAGCCGCCTCTGAGAAAGGAGGTTGTGGAATATATGCTGGATGTAGGTTCCCACATGTGGAGTATGCGACGTAGCAAAGCGAACTTTTTCAGAATCATGGGAGTTTTAAGTGGATTAATTGCTGTTGGAAAATGGTTTGACCAAATCTGCAATTGGAAAAACCCTATCACAACAGTTCTGATTCATATCTTGTTTATAATACTTGTTATGTACCCTGAACTTATCTTGCCAACAATTTTCCTTTACCTCTTTTTGATTGGAGTTTGGTACTATAGATGGAGACCAAGGCACCCTCCTCACATGGACACACGTCTCTCGCATGCAGATTCCGCACACCCTGACGAGCTAGACGAAGAGTTCGACACATTCCCGACCACAAGACCTTCTGACATAGTGAGGATGCGATACGACCGTCTTAGAAGTATTGCCGGTAGAATACAAACTGTTGTCGGCGACTTGGCGACTCAAGGTGAAAGACTGCAGTCTTTGCTTAGCTGGAGAGATCCAAGAGCTACTACACTGTTTGTACTATTTTGTTTGATTACTGCTATTGTTCTTTATGTGACTCCATTTCAAGTTGTGGCTCTTCTCAGTGGAATTTATCTGTTGAGACATCCAAGGTTTCGGCACAAGCTTCCTTCAGTGCCACTCAATTTCTTCAGAAGGTTGCCTGCCAGAACTGATTGCATGCTTTGA 2331 0.4427 MQRPPPEDFLLKETKPHLGGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKELPSKDVTGSCDPYVEVKLGNYKGTTRHFEKKTNPEWSQVFAFSKDRIQASVLEVTVKDKDVVKDDFIGRVWFDLNEVPKRVPPDSPLAPQWYRLEDRKGDKAKGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKGRFPEVYVKAILGNQTLRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKEELLGKCAIPLHMMDRRLDHKPVNTRWFNIEKHVVIMEGDKKKEIKFSSRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSNIGVLEVGILNASGLMPMKTSNGRGTTDAYCVAKYGQKWVRTRTIIDSFAPRWNEQYTWEVFDPCTVITIGVFDNCHLHGGGDKPGGQRDSKIGKVRIRLSTLETDRVYTHSYPLLVLHPTGVKKMGEIQLAVRFTCSSLLNMMHMYSNPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGVWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTTRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATTLFVLFCLITAIVLYVTPFQVVALLSGIYLLRHPRFRHKLPSVPLNFFRRLPARTDCML 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02432 776 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 6 776 IPR047259 -
Vifa5g02432 776 MobiDBLite consensus disorder prediction 1 15 - -
Vifa5g02432 776 MobiDBLite consensus disorder prediction 1 22 - -
Vifa5g02432 776 ProSiteProfiles C2 domain profile. 22 142 IPR000008 -
Vifa5g02432 776 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 505 IPR035892 -
Vifa5g02432 776 SMART C2_3c 365 473 IPR000008 -
Vifa5g02432 776 SMART C2_3c 202 300 IPR000008 -
Vifa5g02432 776 SMART C2_3c 40 136 IPR000008 -
Vifa5g02432 776 FunFam C2 domain-containing protein 347 500 - -
Vifa5g02432 776 Pfam Plant phosphoribosyltransferase C-terminal 621 776 IPR013583 -
Vifa5g02432 776 FunFam C2 domain-containing protein 35 179 - -
Vifa5g02432 776 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 177 IPR035892 -
Vifa5g02432 776 Gene3D C2 domain 362 500 IPR035892 -
Vifa5g02432 776 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Vifa5g02432 776 FunFam C2 domain-containing protein 188 334 - -
Vifa5g02432 776 CDD C2D_MCTP_PRT_plant 365 493 IPR047255 -
Vifa5g02432 776 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 355 IPR035892 -
Vifa5g02432 776 Gene3D C2 domain 188 333 IPR035892 -
Vifa5g02432 776 CDD C2B_MCTP_PRT_plant 40 164 IPR047257 -
Vifa5g02432 776 CDD C2C_MCTP_PRT_plant 202 353 IPR047258 -
Vifa5g02432 776 Gene3D C2 domain 39 161 IPR035892 -
Vifa5g02432 776 ProSiteProfiles C2 domain profile. 347 474 IPR000008 -
Vifa5g02432 776 Pfam C2 domain 364 476 IPR000008 -
Vifa5g02432 776 Pfam C2 domain 40 142 IPR000008 -
Vifa5g02432 776 Pfam C2 domain 201 307 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02432 Vifa-Chr5 804152459 804154789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02432 1 776 Lipid Metabolism Gene Families AT3G57880 90.335 0.0 1479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02432 - - gmx:100818371 1502.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02432 5 804152459 804154789 Vifa2g00513 2 94502598 94505206 ECH
Vifa5g02432 5 804152459 804154789 Vifa5g02432 5 804152459 804154789 ECH
Vifa5g02432 5 804152459 804154789 Vifa3g00559 3 101935679 101938072 PCT