Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g04340 ATGCATAGTAGAGAGAAATCTTTGTATCCACATCCACAGAGAAGAAGAACGCCTTCTTTTTCCTCCATTCTTCTCGACACCATTGATCTTTCCATCGACGAAGTCCAAAACCAACAAACATGTCTCTACAAAAATGGCATTGAAAAACAAAGGATGAATCTTCGTCAAGCTGTGATGATCGAAGATTGGATGGACAAGAATTATACTTCAACAAGCTCTTCAGAATGCAGCTCTGGTGGAATCTTTTCATCCTCAGAAACAGATTCATCTTACAATAGACAAAGATCGAAAACTCAGAAACATATGAACCTGATTCATTGTATCAACTCAGAGAAGCAACAACAACAAAACAAGAAGAACAAGAACAAGAAGGAGAAGAAGAAGAAGCAACAAGGTTGGGAAGATGGTTTTACGAGAACGAAACTGAGAGCTTTGAAAATCTACGGTGAGTTGAATCAAAAAGTGAAACAACCCATTTCACCTGGGAGTAAAATAGCGACATTTCTTAGCTCAATTTTCAATTCTCATAATGTGAAGAAAGCGAAAATGTGTTACGTTGGTGCTGTTGAAGATGTTAGTTTTGATCATAAATCGAAGTCACCGTGTTTTTCTTCTTCTGTTTCTTCGTTTTCTAGAAGGTCTTGCATGAGTAAAACAACACCTTCAAAATCCAACAACGGTGTTAAAAGAACCGTTAGATTCTACCCTGTTAGCGTAATCCTAGGTGAAGATTCTGAACAACAACAACAACCTAGTACAGTTCGAAAGAGTACGAGAAATTCCGTTGAGGTGAAGAAAATTAACAATGTTGTTGTAGGGGATAAAGAAAAAGGAGGTGATAAGAGTGGATTCGATTTTAGAAGGTTTTGTGATAATGGTGAAGATGACGACGATGATGACGATGATGATAATGATGCCGAGAGTTATTCGAGCTCAGATTTGTTTGAGCTTGATCATCTTATTGGAGGTGGAAGGTTTCGTGAAGAGCTTCCGGTTTATGAAACTACTAATTTAGAAACCAATAAGGCCATTGCTAATGGTTTGTGTTTGTAG 1053 0.377 MHSREKSLYPHPQRRRTPSFSSILLDTIDLSIDEVQNQQTCLYKNGIEKQRMNLRQAVMIEDWMDKNYTSTSSSECSSGGIFSSSETDSSYNRQRSKTQKHMNLIHCINSEKQQQQNKKNKNKKEKKKKQQGWEDGFTRTKLRALKIYGELNQKVKQPISPGSKIATFLSSIFNSHNVKKAKMCYVGAVEDVSFDHKSKSPCFSSSVSSFSRRSCMSKTTPSKSNNGVKRTVRFYPVSVILGEDSEQQQQPSTVRKSTRNSVEVKKINNVVVGDKEKGGDKSGFDFRRFCDNGEDDDDDDDDDNDAESYSSSDLFELDHLIGGGRFREELPVYETTNLETNKAIANGLCL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g04340 350 MobiDBLite consensus disorder prediction 109 135 - -
Vifa4g04340 350 MobiDBLite consensus disorder prediction 71 96 - -
Vifa4g04340 350 Coils Coil 108 130 - -
Vifa4g04340 350 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 5 349 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g04340 Vifa-Chr4 1373396241 1373397293 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g04340 - - mtr:25494190 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04340 4 1373396241 1373397293 Vifa4g01282 4 386143139 386144344 ECH
Vifa4g04340 4 1373396241 1373397293 Vifa2g03809 2 1115144097 1115145248 ECH
Vifa4g04340 4 1373396241 1373397293 Vifa4g04340 4 1373396241 1373397293 ECH