Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03809 ATGTATAAGTTTGAGAACACGCGTAGAGAAAAACGGGTTCAGTTTCACAACCAAGCTGAAACTGAAACCCCCTCTTTCTCTTCCGTTGTTCTCGACAAGATTTACAGTTCCATCGACGAAGAAGAGAAAAAGAGTTCCGATAAGAAATTCTTCACAGAAACAACAGGTAACAAAATGAGCAAAACCAATGCTAAATGCAATAGATTCGACAGAGAAGTACCTAATATTCGCCTAAAAATCGGGACACAAACCGAGAGAAAAATGCATCATTATCGTGATCATGATCAAGATGTTATGTTCTTCAGTTCCACTTCAAGCTCTTCAGATTCAAGCTCTGGATTATTATCGTCTTCCTCCGATACAGAACCAATGTACAGAGCAAAATCACTAAATCCGTGTTTTGCTCATTCGAAGCCTAAGCCGGTGAAAATAACCGTTCCTCCAGAGAGAAGCATTGCGAGAGACGAAGATACATTCATCAAATCGAAATCAAGAGCGATGAAGCTTTACAACAATCTCAAAAAGGTGAAGCAACCAATCTCACCAGGTGGAAAACTCACAAGTTTTCTCAACTTGTTTATAAACACAAAGAAAGCAAAAAATGTTTCCTCTCACGAAGACGTGAATGCAGAGAGGAAAGGTAAATCAGGACAATCTTCAACTTGTTCTTCAGCTTCTTCGTTTTCGCGTTCTTGTTTGAGTAAGAACTCGTCTACATCAAGAGATAAATCGCGTAATGGCACTAAAAGAACAGTGCGTTTTTGTCCGGTAAGTGTGATTGTTGATGAAGAAAATCGAGTTTGCGGTAACAAATGTTTGCATGAAGGAGAAGAAGATTCAGGTCTAACCGCATTTGTTCCATCGGCATGGAAAATTGGACGAACAGTGAGTAAGAAGAAAGAACAAGAGGTTTTGAATATGAACAAGAGAGTGGATGATGTTTTAAGAGAGTTTCATCTTAATCGGAAACTTTTAAGAGATTTTACTAGTAGAAAAAATGTGAAGGATGATGATGACGTGTCAAGTAGTTCAAGTTCAGATCTTTTCGAGCTTGATCAAGCTTTGATTGGAAATGATGGGTATTATTTTGAGGATTTGCCTGTGTTCGAAACTACTCATGTTTGTTCTAATCGTGTCATTAGCATAATGTAA 1152 0.3819 MYKFENTRREKRVQFHNQAETETPSFSSVVLDKIYSSIDEEEKKSSDKKFFTETTGNKMSKTNAKCNRFDREVPNIRLKIGTQTERKMHHYRDHDQDVMFFSSTSSSSDSSSGLLSSSSDTEPMYRAKSLNPCFAHSKPKPVKITVPPERSIARDEDTFIKSKSRAMKLYNNLKKVKQPISPGGKLTSFLNLFINTKKAKNVSSHEDVNAERKGKSGQSSTCSSASSFSRSCLSKNSSTSRDKSRNGTKRTVRFCPVSVIVDEENRVCGNKCLHEGEEDSGLTAFVPSAWKIGRTVSKKKEQEVLNMNKRVDDVLREFHLNRKLLRDFTSRKNVKDDDDVSSSSSSDLFELDQALIGNDGYYFEDLPVFETTHVCSNRVISIM 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03809 383 MobiDBLite consensus disorder prediction 1 17 - -
Vifa2g03809 383 Coils Coil 297 317 - -
Vifa2g03809 383 MobiDBLite consensus disorder prediction 201 247 - -
Vifa2g03809 383 MobiDBLite consensus disorder prediction 1 25 - -
Vifa2g03809 383 MobiDBLite consensus disorder prediction 102 122 - -
Vifa2g03809 383 MobiDBLite consensus disorder prediction 214 241 - -
Vifa2g03809 383 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 10 380 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03809 Vifa-Chr2 1115144097 1115145248 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03809 - - psat:127084421 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03809 2 1115144097 1115145248 Vifa2g03809 2 1115144097 1115145248 ECH
Vifa2g03809 2 1115144097 1115145248 Vifa4g01282 4 386143139 386144344 ECH
Vifa4g04340 4 1373396241 1373397293 Vifa2g03809 2 1115144097 1115145248 ECH
Vifa4g01282 4 386143139 386144344 Vifa2g03809 2 1115144097 1115145248 ECH