Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01282 ATGGAGAAATGGAATAAACCTTCAAGAGATCATAGAAAACAACATCAAAGAGAAAACCCATCTTTCTCTTCAACTCTTTTAGACGTAATCTATCGCTCGATCGACGAAGGACATCATAAAACAGAGGAAAAACAAGAGAAACTCATCTTCTACAAAGAATCAACATCAACCATGAGGAAGATGAAGAGTGTTGTAGAAGGTGAAAAGCCAAACTTTAGAAAAACAAGAAAGGTTGAGAATTTGAATGGAAGAAACTCTTTAACAGAATATGAAAGAACAACAAGAAGCAATTCAAACACACTCTCCATGCATTCAAGTTCATCTTCTTCAGAATCAAGTTCAGCTGGTGGATTCTCTTCATCAGATTCAGAATCTTTCTACGGTTTACAAAAACCAAAACCCATTAGAACAAGTGTTTCTGAAAAACCAAACATTGATTCACTTAATCATAGCCATAATCATAACCATAACCATTTTGTTCAAACTCAAAATCCCAAAAATGAGAACGGTTTTGGAAAAACAAAGTCCAAAGCTTTAAGAATTCTATACGGTGATTTGAAGAAATCAAAGCAACCCATTTCACCTGGTGCTAGGCTTGCAAGCTTTTTGAATTCACTTTTCACTTCTAGTGGAAATACCAAGAAATCAAAAGTATCATCATCAGCTACGAAAGTAGCTACGAATTCTGTTTTGGAAGCAAAATCAGCACAAACTTCAACATGTTCATCGGTTTCATCTTTTTCAAGGTCTTGTTTGAGTAAAACTCCTTCATCAAGATCAGGTACTAAAAGATCAGTTAGATTTTGTCCTGTTAGTGTTATTGTTGATGAAGATTGCAAACCATGTGGACACAAGAATTTGCATGAAGGTGAAAAGAGTTTCGTAGCTAATTCAATGTATGATGTGAAAAAAAGTAGTGAAGAATTGAGGTTGCATGTGATACAAGAAAGTAGAAGGGTTGAAGAATTAGCTAGAGATTTGTTGAAGAATTATCAGAAAAAAAATGAAGTTGATTTTGATATGAAATTTGAAGATGAAGATGAAGATGATGATGATGATGATGGAGCTAGTTGTTCAAGTTCTGATTTATTTGAATTGGATAATTTATCAGTAATTGGGATTGAGAGGTATAGAGAAGAATTACCAGTGTATGAAACTACTCATTTCAATTCCAATAGAGTTATTGCAAATGGGTTTATTATGTAA 1206 0.3358 MEKWNKPSRDHRKQHQRENPSFSSTLLDVIYRSIDEGHHKTEEKQEKLIFYKESTSTMRKMKSVVEGEKPNFRKTRKVENLNGRNSLTEYERTTRSNSNTLSMHSSSSSSESSSAGGFSSSDSESFYGLQKPKPIRTSVSEKPNIDSLNHSHNHNHNHFVQTQNPKNENGFGKTKSKALRILYGDLKKSKQPISPGARLASFLNSLFTSSGNTKKSKVSSSATKVATNSVLEAKSAQTSTCSSVSSFSRSCLSKTPSSRSGTKRSVRFCPVSVIVDEDCKPCGHKNLHEGEKSFVANSMYDVKKSSEELRLHVIQESRRVEELARDLLKNYQKKNEVDFDMKFEDEDEDDDDDDGASCSSSDLFELDNLSVIGIERYREELPVYETTHFNSNRVIANGFIM 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01282 401 MobiDBLite consensus disorder prediction 62 80 - -
Vifa4g01282 401 MobiDBLite consensus disorder prediction 1 26 - -
Vifa4g01282 401 MobiDBLite consensus disorder prediction 81 127 - -
Vifa4g01282 401 MobiDBLite consensus disorder prediction 51 172 - -
Vifa4g01282 401 MobiDBLite consensus disorder prediction 339 361 - -
Vifa4g01282 401 MobiDBLite consensus disorder prediction 1 18 - -
Vifa4g01282 401 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 401 IPR039621 GO:0009734
Vifa4g01282 401 MobiDBLite consensus disorder prediction 154 171 - -
Vifa4g01282 401 MobiDBLite consensus disorder prediction 341 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01282 Vifa-Chr4 386143139 386144344 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01282 - - gmx:100798956 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g04340 4 1373396241 1373397293 Vifa4g01282 4 386143139 386144344 ECH
Vifa2g03809 2 1115144097 1115145248 Vifa4g01282 4 386143139 386144344 ECH
Vifa4g01282 4 386143139 386144344 Vifa4g01282 4 386143139 386144344 ECH
Vifa4g01282 4 386143139 386144344 Vifa2g03809 2 1115144097 1115145248 ECH