Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02864 ATGATGAAAGTTTTGTTAAAGTTGGAAATAAATGAAGACAGAATGAAGCAAAAAGCTATGAAGGCAGTCTCTGGGCTTTCAGGGGTTGAGTCAGTTTCAATGGACATGAAAGACAAGAAATTAACCTTAATAGGAGATATCGATCCAGTATGTGTAGTTGCTAAGCTAAGGAAGTTTTGTCATGCTGAAATCATTTCTGTTGGACCAGCTAAAGAGGAAAAGAAAGAAGAACCTAAAAAAAAGGAAGATGATAAGAAAGAAAATCTGATTATTAATCCTTTCATGTTCTATGGAACACATGGCTATTACAATCATCAAATGAAACCACAATACAATCCTTATTACAGTGCTGTTAGTGTTGAAGAGGATCCTAATAGCTGTGTCATCATCTAA 393 0.3461 MMKVLLKLEINEDRMKQKAMKAVSGLSGVESVSMDMKDKKLTLIGDIDPVCVVAKLRKFCHAEIISVGPAKEEKKEEPKKKEDDKKENLIINPFMFYGTHGYYNHQMKPQYNPYYSAVSVEEDPNSCVII 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02864 130 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Vifa3g02864 130 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 127 - -
Vifa3g02864 130 SUPERFAMILY HMA, heavy metal-associated domain 13 59 IPR036163 GO:0046872
Vifa3g02864 130 Gene3D - 1 73 - -
Vifa3g02864 130 Pfam Heavy-metal-associated domain 16 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02864 Vifa-Chr3 805305816 805306317 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02864 - - gmx:100306170 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02864 3 805305816 805306317 Vifa3g02864 3 805305816 805306317 ECH
Vifa1g04411 1 686785622 686786093 Vifa3g02864 3 805305816 805306317 PCT
Vifa3g02864 3 805305816 805306317 Vifa1g04413 1 686821575 686822063 PCT