Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04411 ATGATGAAAGTAGTGTTGAAGGTGGAAATATATGATGACAGAACGAAGCAAAAAGCCATGAAGACAGTATCTGGCATTTCAGGGGTAGAATCAGTTTCTGTGGACATGAAAGACAAGAAATTAACCTTAACTGGAGACATTGATTCAATACATGTAGTGAGCAAATTAAGGAAGTGGTGTCATACTGATATAATCTCTGTTGGTCCTGCCAAAGAGGACAAGAAGAAGGAAGAACCTAAGCCCGATGTGAAGAAGGATCAAATTCAATTAATTGAAACTTATCCCCATTATTTTCAGATGCCACAACCACAACCACATTTCATTCAATACTCCTCTGTTGCAAGATTTGAACAGGATCCTATTGGATGTGTCATATGTTGA 381 0.378 MMKVVLKVEIYDDRTKQKAMKTVSGISGVESVSVDMKDKKLTLTGDIDSIHVVSKLRKWCHTDIISVGPAKEDKKKEEPKPDVKKDQIQLIETYPHYFQMPQPQPHFIQYSSVARFEQDPIGCVIC 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04411 126 Pfam Heavy-metal-associated domain 12 58 IPR006121 GO:0046872
Vifa1g04411 126 Gene3D - 1 73 - -
Vifa1g04411 126 ProSiteProfiles Heavy-metal-associated domain profile. 1 67 IPR006121 GO:0046872
Vifa1g04411 126 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 87 - -
Vifa1g04411 126 SUPERFAMILY HMA, heavy metal-associated domain 2 60 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04411 Vifa-Chr1 686785622 686786093 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04411 - - vum:124842115 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04411 1 686785622 686786093 Vifa1g04411 1 686785622 686786093 ECH
Vifa1g04411 1 686785622 686786093 Vifa3g02864 3 805305816 805306317 PCT