Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04413 ATGATGAAAGTAGTGTTGAAGGTGGAAATATATGATGACAGAACGAAGCAAAAAGCCATGAAGACAGTATCTGGCATTTCAGGGGTAGAATCAGTTTCTGTGGACATGAAAGACAAGAAATTAACCTTAACTGGAGACATTGATTCAATACATGTAGTGAGCAAATTAAGGAAGTGGTGTCATACTGATATAATCTCTGTTGGTCCTGCCAAAGAGGACAAGAAGAAGGAAGAACCTAAGCCCGATGTGAAGAAGGATCAAATTCAATTAATTGAAACTTATCCCCATTATTTTCAGATGCCACAACCACAACCACTTTTCATTCAATACTCCTCTGATGCAAGATTTGAACAGGATCCTATTGGATGTGTCATATGTTGA 381 0.378 MMKVVLKVEIYDDRTKQKAMKTVSGISGVESVSVDMKDKKLTLTGDIDSIHVVSKLRKWCHTDIISVGPAKEDKKKEEPKPDVKKDQIQLIETYPHYFQMPQPQPLFIQYSSDARFEQDPIGCVIC 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04413 126 Gene3D - 1 73 - -
Vifa1g04413 126 ProSiteProfiles Heavy-metal-associated domain profile. 1 67 IPR006121 GO:0046872
Vifa1g04413 126 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 87 - -
Vifa1g04413 126 SUPERFAMILY HMA, heavy metal-associated domain 2 60 IPR036163 GO:0046872
Vifa1g04413 126 Pfam Heavy-metal-associated domain 12 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04413 Vifa-Chr1 686821575 686822063 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04413 - - gmx:100306170 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04413 1 686821575 686822063 Vifa1g04413 1 686821575 686822063 ECH
Vifa1g04413 1 686821575 686822063 Vifa3g02865 3 805336609 805337110 PCT
Vifa3g02864 3 805305816 805306317 Vifa1g04413 1 686821575 686822063 PCT