Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04016 ATGCATATCTGTGGATATGTTCCGCCTTGGCTCTGTCAGATTCTCGCTTGCATGGGAGGTTGTCTTGGATGTTTCTCAAAGCCTCTTGAAATCATTTTGATGGGTGAGGCCGGTGCATCTAAGGAACTAAAATCTCAAGCCCAAACAATGGACAAAGACAACAGATCAGAAGATTTTTGGAACAGCAGTGCTATTGATGTGGATCACAGTGCAACTCAATCCCAGACAAGCATCTCATCCGTCGTCGTGTCAAACCATCCTTCTGATCCTCAAAGTAGTGATGCCATTCAGACTGATCCTCCAGAGTTTGTTAATCATGGTCTTCTTCTGTGGAAACAAATAAGACAACAGTGGGTTGGAAATAGAAAGCCTGAGCGAAAGACACAAGGTGAAGAACCCAAAATAAGTTGGAACGCTTCGTACGAGAGTTTTCTTGGGACCAGCAAGCCTTTTCCGCAGCGTATTCCTCTTGGAGAAATGGTTGACTTTCTTGTTGATATATGGGAACTAGAGGGCATGTATGATTAA 528 0.4375 MHICGYVPPWLCQILACMGGCLGCFSKPLEIILMGEAGASKELKSQAQTMDKDNRSEDFWNSSAIDVDHSATQSQTSISSVVVSNHPSDPQSSDAIQTDPPEFVNHGLLLWKQIRQQWVGNRKPERKTQGEEPKISWNASYESFLGTSKPFPQRIPLGEMVDFLVDIWELEGMYD 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04016 175 MobiDBLite consensus disorder prediction 76 96 - -
Vifa2g04016 175 Pfam Protein of unknown function (DUF4050) 66 132 IPR025124 -
Vifa2g04016 175 Pfam Protein of unknown function (DUF4050) 134 175 IPR025124 -
Vifa2g04016 175 PANTHER OS07G0479600 PROTEIN 7 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04016 Vifa-Chr2 1178486844 1178487999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g04016 - - tpra:123898289 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04016 2 1178486844 1178487999 Vifa2g05571 2 1655535786 1655538696 ECH
Vifa2g04016 2 1178486844 1178487999 Vifa3g04552 3 1304761472 1304762605 ECH
Vifa2g04016 2 1178486844 1178487999 Vifa2g04016 2 1178486844 1178487999 ECH