Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g05571 ATGCCTGTTAGAGAACTGAAGGGAGAAAGAGAGAAACCCATCGGTTTCACAAATCAATGCACAATTTCACACCCACACCATCTATCTTCACCTCCTAAAGGGTTGCTTTGGAATCGGGTTTTTTTTTGGGTGTTTCGGACGTTACATGCATATGGGAGCAGTGGTTGTGTTGGATGCTATAAAAGGCCCGTACTAGTTACTACTGTGGAAGCACCGTCAAAAGGGGTTATAATAGTAGGCAAGGCAGTGGAGAAACCTAGTACATCAGAGGATTTCTGGACCACCAGCACGCATGATATGGACAACAGTGCTGTTCAATCGCAAGGAAGTATATCTTCAACCAGTCTAACTAACCAAGCTGTGGTTCCTCATGGCAGTTCTTCCAACAACCCGCCTGAGTTTGTAAATCATGGTCTAATTCTATGGAATCAGACTCGACAGCGCTGGGTTGGAAACAAAAAGTCCGAGAATCGAACACAACAATTGCGAGAACCTAAATTGAGTTGGAATGCAACATATGAAAGTTTACTGACTAGCAACAAGCCATTCCGTCAGCCCATCCCTCTTGCTGAAATGGTAGATTTTCTTGTGGACGTTTGGGAACAGGATGGCCTGTATGACTGA 624 0.4455 MPVRELKGEREKPIGFTNQCTISHPHHLSSPPKGLLWNRVFFWVFRTLHAYGSSGCVGCYKRPVLVTTVEAPSKGVIIVGKAVEKPSTSEDFWTTSTHDMDNSAVQSQGSISSTSLTNQAVVPHGSSSNNPPEFVNHGLILWNQTRQRWVGNKKSENRTQQLREPKLSWNATYESLLTSNKPFRQPIPLAEMVDFLVDVWEQDGLYD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g05571 207 Pfam Protein of unknown function (DUF4050) 96 165 IPR025124 -
Vifa2g05571 207 Pfam Protein of unknown function (DUF4050) 166 207 IPR025124 -
Vifa2g05571 207 PANTHER OS07G0479600 PROTEIN 42 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g05571 Vifa-Chr2 1655535786 1655538696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g05571 - - mtr:11429345 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04016 2 1178486844 1178487999 Vifa2g05571 2 1655535786 1655538696 ECH
Vifa2g05571 2 1655535786 1655538696 Vifa2g05571 2 1655535786 1655538696 ECH