Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04552 ATGTATTCTAGGTGTTGCTTGTTACCACTTTTTGATAGATTCTCTATAAAGAAACTTTGTTGTTCAATTTTTCTGTTTTGTTGTTCTTGTTTTCGCATTCTTCTTGTTATTTCCATGGAAAAATTCAAGCTTAAATTCAAAGGAATTTTCTCTAGCATAGGTTGTCTTCGAAGCCGCGAAAAACCTTCTGTTGGCATTACAATGGATGAGGGAATTCAAGGACAAACTGTGATCAAGAATGATGGATCATCAGATTTTTGGAGTAGTAGTGCTTACGAAAAGGATAATAGCGCGGCTCCATCGATGAGGAGCGTTTCGTCGAGTGGAATAACAATGAATTCTTCTTCTGATCTTCAAAGTAATTCAAGCAGTCAAATTAATCCTCATGAGTTTGTCAATCAAGGGCTTATTGTATGGAACCAGATAAGGCAACAATGGGGTCGAAACAAAAGGCCTGAAAGTAAGACAGAAGATAGAGAACCAAAAATAAGTTCAAATGCTGCCTATGAAGATCTACTTGGAAACAATAAGCCTTTTCCCAAACCTATTCCTCTAAGAGAAATGATTAACTTTCTTATTGATATTTGGGAGCAAGATGGTCTATATGATTGA 612 0.3611 MYSRCCLLPLFDRFSIKKLCCSIFLFCCSCFRILLVISMEKFKLKFKGIFSSIGCLRSREKPSVGITMDEGIQGQTVIKNDGSSDFWSSSAYEKDNSAAPSMRSVSSSGITMNSSSDLQSNSSSQINPHEFVNQGLIVWNQIRQQWGRNKRPESKTEDREPKISSNAAYEDLLGNNKPFPKPIPLREMINFLIDIWEQDGLYD 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04552 203 PANTHER OS07G0479600 PROTEIN 46 203 - -
Vifa3g04552 203 MobiDBLite consensus disorder prediction 98 124 - -
Vifa3g04552 203 MobiDBLite consensus disorder prediction 148 165 - -
Vifa3g04552 203 Pfam Protein of unknown function (DUF4050) 95 160 IPR025124 -
Vifa3g04552 203 Pfam Protein of unknown function (DUF4050) 163 203 IPR025124 -
Vifa3g04552 203 MobiDBLite consensus disorder prediction 147 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04552 Vifa-Chr3 1304761472 1304762605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g04552 - - tpra:123915180 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04552 3 1304761472 1304762605 Vifa3g04552 3 1304761472 1304762605 ECH
Vifa2g04016 2 1178486844 1178487999 Vifa3g04552 3 1304761472 1304762605 ECH