Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02865 ATGATGAAAGTTGTGTTAAAGTTGGAAATAAATGAAGACAGAATGAAGCAAAAAGCAATGAAGGCAGTCTCTGGGCTTTCAGGGGTTGAGTCAGTTTCAATGGACATGAAAGACAAGAAATTAACCTTAATAGGAGATATCGATCCAGTATGTGTAGTTGCTAAGCTAAGGAAGTTTTGTCATGCTGAAATCATTTCTGTTGGACCAGCTAAAGAGGAAAAGAAAGAAGAACCTAAAAAAAAGGAAGATGATAAGAAAGAAAATGTGATTATTAATCCTTCCATGTTCTATGGAACACATGGCTATTACAATCATCACATGAAACCACAATACAGCCCTTATTACGGTGCTGTTAGCGTTGAAGAAGATCCTAATAGCTGTGTCATCATCTAA 393 0.3613 MMKVVLKLEINEDRMKQKAMKAVSGLSGVESVSMDMKDKKLTLIGDIDPVCVVAKLRKFCHAEIISVGPAKEEKKEEPKKKEDDKKENVIINPSMFYGTHGYYNHHMKPQYSPYYGAVSVEEDPNSCVII 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02865 130 Gene3D - 1 73 - -
Vifa3g02865 130 SUPERFAMILY HMA, heavy metal-associated domain 15 59 IPR036163 GO:0046872
Vifa3g02865 130 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 127 - -
Vifa3g02865 130 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Vifa3g02865 130 Pfam Heavy-metal-associated domain 16 58 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02865 Vifa-Chr3 805336609 805337110 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02865 - - gmx:100306170 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02865 3 805336609 805337110 Vifa3g02865 3 805336609 805337110 ECH
Vifa1g04413 1 686821575 686822063 Vifa3g02865 3 805336609 805337110 PCT