Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00603 ATGGCTTCAACCCAGCACCATGTCCAAGGCCTAACAGCTGAGGAAGAAACAGAACTAGAACCTGTGATAAAACAATACCACCTTTTCGAACACTGTCCCAACAAATGTTCTTCCATAATATCGTACCGCATCGATGCTCCTGCGAGCACGGTTTGGCCGTTCGTGCGAAGCTTCGAGAGCCCTCAGAAGTACAAGCACTTCATCAAAGGGTGCAACATGAGAGGTGACGGTGGCGTCGGAAGCATAAGAGAAGTAACCGTTGTTTCTGGTCTTCCGGCGTCGACGAGCACCGAGAGACTCGAGATTTTGGACGATGACAAACACGTGCTGAGCTTTAGGGTGGTTGGTGGCGAGCACCGACTCAAAAACTACCGTTCCGTTACGTCGGTCAACGAGTTCAGGAAAGAGGGTAGGGTTTACACCATCGTATTGGAATCGTATGTCGTAGACATACCCGAAGGGAATACGGAGGAAGATACGAAGATGTTCGTGGACACTGTGGTGAAACTCAACCTTCAGAAACTTGGGGTGGTGGCCATGGCTTCTTCTTCATCCATGCATGAACAATAA 570 0.4947 MASTQHHVQGLTAEEETELEPVIKQYHLFEHCPNKCSSIISYRIDAPASTVWPFVRSFESPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDKHVLSFRVVGGEHRLKNYRSVTSVNEFRKEGRVYTIVLESYVVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMASSSSMHEQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00603 189 CDD PYR_PYL_RCAR_like 36 175 - -
Vian7g00603 189 Pfam Polyketide cyclase / dehydrase and lipid transport 43 175 IPR019587 -
Vian7g00603 189 Gene3D - 1 189 IPR023393 -
Vian7g00603 189 FunFam Abscisic acid receptor PYR1 1 188 - -
Vian7g00603 189 SUPERFAMILY Bet v1-like 36 176 - -
Vian7g00603 189 PANTHER - 36 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00603 Vian-Chr7 13934117 13934686 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian7g00603 K14496 - gmx:100778183 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00551 9 6328799 6331693 Vian7g00603 7 13934117 13934686 ECH
Vian7g00603 7 13934117 13934686 Vian7g00603 7 13934117 13934686 ECH
Vian7g00603 7 13934117 13934686 Vian4g02136 4 38204815 38205375 PCT