Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00551 ATGATGAACGGTGACTCTCGCAGTGCTCTTGAGGCACAGTACATAAGGAGACATCACAAACATGAACTAAGGGAAAACCAGTGCACTTCTGCTCTTGTTAAACACATCAAAGCCCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCCCAGAAATATAAACCATTTGTTAGCAGATGTATCATGCAAGGAGACCTTGGCATTGGAAGTGTTAGAGAAGTGAATGTTAAATCTGGCCTTCCAGCCACAACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAGCACATTCTTGGCATTAGGATTGTTGGAGGTGACCATAGGCTGAGGAACTATTCTTCCATAATAACAGTGCATCCAGAGGTGATTGAGGGAAGACCTGGAACAATGGTGATTGAATCATTTGTGGTGGATGTGCCTGATGGAAACACTAAGGATGAAACTTGCTACTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCTCTTGCTGATGTCTCAGAGAGGATGGCAGTTCAAGGCCGAACCGATCCCATCAACCATTAA 558 0.4444 MMNGDSRSALEAQYIRRHHKHELRENQCTSALVKHIKAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIEGRPGTMVIESFVVDVPDGNTKDETCYFVEALIRCNLSSLADVSERMAVQGRTDPINH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00551 185 Gene3D - 2 181 IPR023393 -
Vian9g00551 185 PANTHER - 25 169 - -
Vian9g00551 185 SUPERFAMILY Bet v1-like 28 169 - -
Vian9g00551 185 FunFam Abscisic acid receptor PYL9 2 181 - -
Vian9g00551 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Vian9g00551 185 CDD PYR_PYL_RCAR_like 28 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00551 Vian-Chr9 6328799 6331693 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00551 K14496 - gmx:100500065 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00551 9 6328799 6331693 Vian7g00603 7 13934117 13934686 ECH
Vian9g00551 9 6328799 6331693 Vian9g00551 9 6328799 6331693 ECH