Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02136 ATGGCTTCAGAAGCACTGCTTGAGCTAGGTCTAACCGTAGAGGAATTCACCGAACTGGAGAGCATCATCAACACGCACCACAAGTTCGCGCCATCCCCCAAAATCTGCACCTCCATCATAGCGCAGCGTATCGAGGCTCCCGCGCACACGGTCTGGCCCCTCGTTCGAAGCTTCGATAACCCGCAGAAGTACAAGCACTTCATCAAGAGCTGCAACATGCGCTCCGGCGACGGCGGCGTCGGCAGCATCCGGGAGGTCACCGTGGTGTCTGGCCTCCCTGCCTCCACCAGCACCGAGCGCCTCGAGATTCTCGACGACGTCAACCACCTGCTCAGCTTCCGCGTGGTCGGCGGCGAGCACAGGCTCCACAACTACCGCTCCGTGACGTCGGTGAACGAGTTCAACAAGGACGGTAAGGTTTACACCGTTGTGTTGGAATCCTACGTTGTGGACATTCCCGAAGGGAACACCGGAGTTGATACCAAGATGTTTGCGGACACCGTCGTTAAGCTTAACCTTCAGAAACTTGGGGAGGTTGCCATGGCTACCATTCTGCACTGA 561 0.574 MASEALLELGLTVEEFTELESIINTHHKFAPSPKICTSIIAQRIEAPAHTVWPLVRSFDNPQKYKHFIKSCNMRSGDGGVGSIREVTVVSGLPASTSTERLEILDDVNHLLSFRVVGGEHRLHNYRSVTSVNEFNKDGKVYTVVLESYVVDIPEGNTGVDTKMFADTVVKLNLQKLGEVAMATILH 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02136 186 Gene3D - 2 186 IPR023393 -
Vian4g02136 186 FunFam Abscisic acid receptor PYR1 1 186 - -
Vian4g02136 186 SUPERFAMILY Bet v1-like 36 181 - -
Vian4g02136 186 PANTHER - 36 178 - -
Vian4g02136 186 Pfam Polyketide cyclase / dehydrase and lipid transport 42 176 IPR019587 -
Vian4g02136 186 CDD PYR_PYL_RCAR_like 36 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02136 Vian-Chr4 38204815 38205375 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02136 K14496 - gmx:100794619 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02136 4 38204815 38205375 Vian4g02136 4 38204815 38205375 ECH
Vian7g00603 7 13934117 13934686 Vian4g02136 4 38204815 38205375 PCT