Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01083 ATGGTTGATTCAGAGCCAAAGTTCTTCATCCCGGAGTCAATCCAGGGCGTCAATTTCGACGTCACGGCACAGATGAGGATGGTCTGGGAGGTCATTAAGGCGCCGCTGATCGTGCCGCTGCTCAACCTGGCCGTGTACATTTGCCTCGCCATGGCCCTCATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTCGTCAAACTCTTCTGGAAGAAACCCCACCAACGCTACAGGTTTGAACCCCTCCAAGAAGACGAGGAACTCGGCAACACCAACTTCCCCGTCGTCCTTGTTCAGATTCCCATGTTCAATGAAAAAGAGGTGTACAAGGTGTCAATTGGAGCAGCTTGTAATCTCTCATGGCCCGCGGATCGTCTTGTGATTCAAGTGCTGGACGATTCAACTGACCCTGCCATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGCAAAGGGATAAACATAACATACCAAATCAGAGAGACTCGAGGTGGATACAAAGCTGGTGCTCTAAAAGAAGGCCTAAAACGTAGCTATGTGAAACATTGCGAGTACGTGGCAATTTTTGATGCTGATTTTCGTCCAGAACCAGATTTTCTCAGACGTTCCATTCCTTTCTTGGTGGGCAACCCCGACATTGCTCTTGTTCAAGCTCGTTGGAGATTTGTGAATGCTGATGAGTGTTTGTTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTCACTGTAGAGCAAGAAGTTGGGTCAGCCACTCATGCTTTCTTTGGATTCAACGGAACTGCTGGTATTTGGAGAATAGCTGCTATTAATGAAGCTGGAGGGTGGAAAGACAGAACAACAGTGGAAGATATGGATCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTCGGAGACCTCCAGGCAAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACAGATGGTCTTGTGGTCCTGCAAATTTGTTCCGCAAAATGGTTATGGAGATAGTAAGGAACAAGAAAGTTAGATTCTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTTAGAAAAATCATAGCTCACATGGTCACTTTCTTCTTCTACTGTCTTGTGATTCCTCTCACAATCTTGATCCCTGAGGTTCACGTTCCCATATGGGGAGCTGTTTATATTCCTTCTGTCATAACCATTCTCAATTCAGTAGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACAAAGGCAACATTTATAGGTCTCTTAGAGTATGGGAGAGCTAATGAATGGGTTGTGACTGAAAAACTTGGTGATTCTGTCAATACCAATAACAAGAATAAATCAGGAGATGCTGCCAAGAAGAATGTTGCCACCAAGGCACCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAACTTACTGGAGCTGGGATTTGCTGCATTCCTCTTCTTATGTGGTTGCTATGATTTTGTGCATGGGAAGCACAACTACTTCATCTACCTCTTCCTTCAGACCATAACATTCTCAATTGTAGGATTTGGCTATGTTGGCACCATTGTGTAA 1629 0.4469 MVDSEPKFFIPESIQGVNFDVTAQMRMVWEVIKAPLIVPLLNLAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYRFEPLQEDEELGNTNFPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPAIKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCLVIPLTILIPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNTNNKNKSGDAAKKNVATKAPKKTRSKFVERLNLLELGFAAFLFLCGCYDFVHGKHNYFIYLFLQTITFSIVGFGYVGTIV 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01083 542 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Vian5g01083 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 377 IPR029044 -
Vian5g01083 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 316 IPR029044 -
Vian5g01083 542 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 540 - -
Vian5g01083 542 Pfam Glycosyl transferase family group 2 190 382 IPR001173 -
Vian5g01083 542 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01083 Vian-Chr5 32698385 32703757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g01083 1 542 Miscellaneous Gene Families AT5G22740 81.066 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian5g01083 K13680 - gmx:100791645 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g01083 5 32698385 32703757 Vian5g01083 5 32698385 32703757 ECH
Vian2g02443 2 44950039 44954103 Vian5g01083 5 32698385 32703757 ECH
Vian3g02138 3 30594085 30599853 Vian5g01083 5 32698385 32703757 ECH