Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02267 ATGGAATCCAAAGACCCTCCGGATATAAAATCTTTCAAGAAATTCCCATTAACATTGAGGTTTGTAGTTTTAGTAGTGACCGTCCTTTGTGGAATTTACATTTTCACAATATCTGTAGAGCAAAAAGGTGTAAGCACAAGTAACAAGTTGCTAGAAAACACTGTCTTCAAGCAGCCATGTCATCATCCTCCTGGTGTTGAAGAATGGGAAGTCTCATACTTGCACTATCCAGAACCCAAAACCTTTAGCAGAGAAGAGTGTGCCTGCAATCCTGTTCGATTTTTCTGCATTGTGTCAATGCAAAGATCTGGGAGCGGTTGGTTTGAGACATTTTTGAACAGTCATATTAATGGTTTGATGGAGCATCATGAGGAAATTGGAGAATACTTTGAACGAAGACGAGTTTCTATAATCTTCCTATTCAGAAAGAACTTGCTCCGTAGAATGATATCAGTGCTAGCGAATGCCTATGACAAAGATGCCAAGGCACTGAATGGAACTCATAAGTCTCACGTGCACTCTGCAACGGAGGCTAAAATTCTTGCCAACTATAAACCACGGCTCAATATCACATTGCTGATACCAGAGCTAAAGATAATGAAGGAGACAGCAGCAAAAGCCATCACATACTTTAGGAACACTCGCCATATTGTTCTCTATTACGATGATCTTGTCCACAATCGCACTAAACTGAAGGACGTTCAAGAATTTCTAAGGGTGCCATACAGAGATCTGGAGAGTCGTCAGGTAAAGATACACACTGCCCCATTATCGGAGCAGATTGAAAACTGGGATGAGGTCCAGGAAGAGCTCACAGGGACGCCATTCCAATGGTTTAATGACAAGGGAGTAGCCATGAGATTATATTGCAAGCATCAGTACCACTTTTTGGAAACTCAGGGAAGGCCACTGCAATTGGAGACCAAGCATGAAAACAGTATCACAGAAATGGCTAAAGTGGCAGAATATACTTCAACTGCAGCACTTAACACCAAGAATCCACAAAATGACAGTGTCAGAAACTGGACTGTGAACGATTTCCAACCGACAGATCCAGGGCACAGTCCTGGTGCTGGTCATTCCTCACCACGCGCCGACATTCCAAAGCCCTAG 1113 0.4286 MESKDPPDIKSFKKFPLTLRFVVLVVTVLCGIYIFTISVEQKGVSTSNKLLENTVFKQPCHHPPGVEEWEVSYLHYPEPKTFSREECACNPVRFFCIVSMQRSGSGWFETFLNSHINGLMEHHEEIGEYFERRRVSIIFLFRKNLLRRMISVLANAYDKDAKALNGTHKSHVHSATEAKILANYKPRLNITLLIPELKIMKETAAKAITYFRNTRHIVLYYDDLVHNRTKLKDVQEFLRVPYRDLESRQVKIHTAPLSEQIENWDEVQEELTGTPFQWFNDKGVAMRLYCKHQYHFLETQGRPLQLETKHENSITEMAKVAEYTSTAALNTKNPQNDSVRNWTVNDFQPTDPGHSPGAGHSSPRADIPKP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02267 370 MobiDBLite consensus disorder prediction 329 370 - -
Vian4g02267 370 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 118 280 - -
Vian4g02267 370 Gene3D - 116 271 IPR027417 -
Vian4g02267 370 MobiDBLite consensus disorder prediction 329 350 - -
Vian4g02267 370 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 249 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02267 Vian-Chr4 39515126 39520251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02267 - - gmx:100808615 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02267 4 39515126 39520251 Vian10g00603 10 5701499 5705438 ECH
Vian4g02267 4 39515126 39520251 Vian1g01676 1 19306997 19310018 ECH
Vian4g02267 4 39515126 39520251 Vian4g02267 4 39515126 39520251 ECH