Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g01676 ATGAATGCTTTGAGCTCCCTCTGCATTTTTCGATCTGACCCATTAGCCTTAAATGACATTCTGGTTATAAAGCCTCCGAAGAAATCGCCTTTGTTGTTAAGGATGTCGGTTCTGATCTTTTCGATGGTATGCGGTGTTTTTATCTGTTCCGTGTGTTCAAAGCAGATAAGCACTCATGCTAGGACTATGCTTATGGAGTTGCAAAATGAGAAGCCTTCGCGGAATAGATTGGGCCTAACAGATGTTCCTTTGTTGCATTACCCCAATCCCGTGTCTTTCAACAGGAGTGAGTGTGCTGGGAATCCTGTGCGGTTCTTTGCTATTTTGTCAAATCAGAGATCAGGCAGTGGGTGGTTTGAGACCCTTTTGAATAGCCATATTAATGTGAGCTCCAATGGGGAGATTTTTTCTGTTAGAGAAAGAAGAGTAAATGTTTCTACCATTGTGCAGACTTTGGATAAAGTTTACAACTTGGATTGGTTCAGTAGTGCTTCCAAGAATGAGTGCTCAGCTGCAATTGGATTGAAGTGGATGCTTAATCAGGGATTAATGGAGCACCCGAAGGAAGTAGCAGATTATTTCAACCGTAGAGGTGTTTCTGTCATATTTCTTTTTCGAAGAAACTTATTGCGTAGAATGGCGGATACTCTTTCAAAGTACAAGCCTATCATTAATTCTACATCATTACTGGTTGATTTGAAGGATATGGAGATGAGAATGGCAAAGGCTTTAGAGTACTTCAGCATCAATAGGCATATGATCCTGTACTATGAAGATTTAATTAGAAATCGTACTGAGACATATGGTGATAAGATTCCACAGACTACCTCCATCAACGGCAACTGCTTCCTGTTTCTAGGCACCCTATAA 870 0.408 MNALSSLCIFRSDPLALNDILVIKPPKKSPLLLRMSVLIFSMVCGVFICSVCSKQISTHARTMLMELQNEKPSRNRLGLTDVPLLHYPNPVSFNRSECAGNPVRFFAILSNQRSGSGWFETLLNSHINVSSNGEIFSVRERRVNVSTIVQTLDKVYNLDWFSSASKNECSAAIGLKWMLNQGLMEHPKEVADYFNRRGVSVIFLFRRNLLRRMADTLSKYKPIINSTSLLVDLKDMEMRMAKALEYFSINRHMILYYEDLIRNRTETYGDKIPQTTSINGNCFLFLGTL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g01676 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 106 268 IPR027417 -
Vian1g01676 289 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 214 266 - -
Vian1g01676 289 Gene3D - 104 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g01676 Vian-Chr1 19306997 19310018 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g01676 - - gmx:100778075 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00603 10 5701499 5705438 Vian1g01676 1 19306997 19310018 ECH
Vian4g02267 4 39515126 39520251 Vian1g01676 1 19306997 19310018 ECH
Vian1g01676 1 19306997 19310018 Vian1g01676 1 19306997 19310018 ECH
Vian1g01676 1 19306997 19310018 Vian10g00603 10 5701499 5705438 PCT