Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian10g00603 ATGGTAGAAGACATGTGTTTGTTCTACAAGGAAATTCTCGTTATGAAGCCTCCAAAGAGATCACCGATGTTGTTAAGGGCAGCAGTTGTGATGTTTTCGATGGTTTGTGGCGTTTTTATCTTCTCTGCATGTTTAAAGCAGATAAGCACACAAGCTAGGACTACATTTGTGGATTTTAAAGTCATTGACAACCATTCTCGTGGTAGATTGAATCTAATGAATACTCCTCACCTACTACATTATCCTAAACCTGTATCCTTTAGCAGGTATTGGGAAGTTTCTGTAAATCTTTATCAGTTGCCTTTAATTAGGTGCTCATTGATTGCCACGTTGTTTGCCAGGAACGAGTGTGATCATAATCCTGTACTGTTCTTTGCCATATTGTCCAATCAGAGATCAGGTAGTGGGTGGTTTGAGACCCTTTTAAATAGCCACATTAATGTAAGCTCGAACGGGGAGATATTTTCTGTTAGAGAGAGAAGGAAAAATGTGTCTTCCATTTTGCAGACTTTAGATAAAGTTTACAATTTGGACTGGTTCAATAGTGCTTCGAAGAACGAGTGCTCTGCTGCAACTGGCTTAAAGTGGATGCTTAATCAGGGGTTGATGGAACACCATAAGGAAATAGCGGAGTATTTCAACCGCAGACGTGTTTCTGTTATATTTCTTTTCCGGAGGAACTTGCTACGCAGGATGGTATCAATGCTAGCCAATTCATATGATCGTTATGCCAAGCTATTGAATGGAACACACAAGGCTCATGTACACTCTGCAGAAGAGGCGGATATTCTTTCAAAGTACAAGCCTATCATTAATTCGACATCCTTGCTGGATGACTTGAAGGATATGGAGATGAGATCTGCTAAAGCTTTAGAATACTTCAACAGAACTCGGCAAATGATTGTGTACTATGAGGATCTTATGAGAAATCACACTAAACTAATAGATGTTCAAGAGTTCTTAGGGTTGCCTCAGATGGAGTTAACGAGCCGTCATGTTAAGATACATAGAGGACCATTGTCAGACCACATTCAGAACTGGGATGACGTTAACAAAACGCTGAAAGGAACCGTTTACGAGAGTTTTCTTGAAGCTGACTATTAG 1104 0.4004 MVEDMCLFYKEILVMKPPKRSPMLLRAAVVMFSMVCGVFIFSACLKQISTQARTTFVDFKVIDNHSRGRLNLMNTPHLLHYPKPVSFSRYWEVSVNLYQLPLIRCSLIATLFARNECDHNPVLFFAILSNQRSGSGWFETLLNSHINVSSNGEIFSVRERRKNVSSILQTLDKVYNLDWFNSASKNECSAATGLKWMLNQGLMEHHKEIAEYFNRRRVSVIFLFRRNLLRRMVSMLANSYDRYAKLLNGTHKAHVHSAEEADILSKYKPIINSTSLLDDLKDMEMRSAKALEYFNRTRQMIVYYEDLMRNHTKLIDVQEFLGLPQMELTSRHVKIHRGPLSDHIQNWDDVNKTLKGTVYESFLEADY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian10g00603 367 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 2 367 - -
Vian10g00603 367 Gene3D - 124 353 IPR027417 -
Vian10g00603 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 349 IPR027417 -
Vian10g00603 367 Pfam Sulfotransferase domain 127 332 IPR000863 GO:0008146
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian10g00603 Vian-Chr10 5701499 5705438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian10g00603 - - gmx:100789437 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian10g00603 10 5701499 5705438 Vian1g01676 1 19306997 19310018 ECH
Vian4g02267 4 39515126 39520251 Vian10g00603 10 5701499 5705438 ECH
Vian10g00603 10 5701499 5705438 Vian10g00603 10 5701499 5705438 ECH
Vian1g01676 1 19306997 19310018 Vian10g00603 10 5701499 5705438 PCT