Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g02075 ATGCAGTTGCGAACACGAGGCACTTCCACTGCCAATGCATTAACCTCACGCGCTCACCAAATCCATTCACATTCCCATTCTCTTTCCCTCTCACACCCTCACTCTCCCCCTCAATGGTTTTCCATCCTCCGCCAGGCCATCGCCGCCTCCGACCTTCTCCTGGGGAAGCGCGCCCACGCCCGCATATTAACGTCCGGCCACCATCCCGAATGTTTCCTCACCAACAACCTCATCACCATGTACGCCAAATGCGGTTCCCTCTCTTCCGCGCGCAAACTGTTCGACGCAACGCCCCACGAAGCCAAAGACCTCGTAACCTGGAACGCCATCCTCTCCGCCTACGCCCAAGCGGACAACCCCTACGACGGCCTCCACCTCTTCTGTCAACTCCGCCACTCCGCCCTGTCCACCACGCGCCACACTCTCGCTCCTGTCCTCAAAATGTGTTTCCTCTCTGGTTCCTCCTTCGCCTCCGCGTCCCTCCACGGTTACGCCCTTAAGATCGGGTTACTATGGGACGTGTTCGTGGCCGGCGCTCTCGTCAACATTTACTCCAAGTTTGGACGAATCAGAGAGGCTCGTCTTTTGTTCGATGGAATGGCCGTGAGGGACGTTGTGCTCTGGAACCTCATGATGAAGGCTTACGTCGACACGTGTCTCGAACACGAAGCGTTGCTTCTCTTCTCAGAGTTTCACCGAACGGGGCTGCGTCCCGATGACGTCACTCTTCGTGCTCTGGCGCGGGTTAGTATGAGTAGAAATACTGCTTTCGAATCGCAGTTGAAGCAGCTTCGAGCTTATGCCACAAAATTGTTTATACGCGACAGTGACAATTCGGATGTTATTGCATGGAACAAGACACTATCTCGGTGTCTTCAGAGAGGTGAAGCTTGGGAAGCTGTAGATTGTTTTAGGGATATGATAAAGTCAAGTGTTGCTTGTGACAGCTTGACTTTTGTTGTGATGTTGTCTGTGGCAGCCAGTTTGAATTGCCTTGAACTGGGGAAACAGATTCACGGTGCTGTCATTAGGACGGAGCTGGATCAAGTTGTTTCTGTTGGAAACAGCCTTATTAATATTTATGTTAAGGCTGGTTCAGTTTCTCGTGCGAGATCTGTGTTTGGTCAAATGAATGAAGTGGATTTGATATCATGGAACACCATGATATCTGGCTTTGCACTGAATGGTTTGGAGGAGTGTTCTGTTGGTTTCTTCGTTGATTTATTACGTGATGGCCTGTTGCCGGATCAATTCACTATTGCGAGCGTTTTGAGGGCTTGTTCCTCTCTTGAACAGGGTTGCCATCTTGCCACACAGATTCATACTTACGCAATGAAAGCTGGTGTTGTCTTGGATTCATTTGTTTCAACAACTCTTATTGATGTCTATTCCAAGAGTGGGAGGACGGAGGAGGCAGAAGTTCTTTTCGTTAACCAAGATGATTTGGCATCTTGGAATGCTATGATGCATGGGTATATAATGCGTGATGATTTTCACAAAGCATTGAGGCTTTATTCGATATTGCATGAGAGTGGAGAGAGAGGGGATCAGATCACTGTGGTGAATGCAGCTAAAGCTGCTGGGGGATTGGTGGGGCTTGAACAAGGGAGGCAAATTCATGCTGTTGTCGTAAAAAGAGGGTTTAATTTAGATTTGTTTGTCATCAGTGGTGTTCTTGATATGTATCTAAAATGTGGAGAGGTGGAAAGTGCAAGCAGAGTTTTCACCGAGATACCCTCACCTGATGATGTTGCTTGGACTACTATGATATCAGGATGTGTGGAAAATGGACAAGAGGATCATGCTCTTTCCACATACCATCAGATGAGACTTTCCAGGGTGCAGCCTGATGAATATACCTTTGCTACCCTAGTCAAGGCTTGTTCTCTTTTAACAGCATTGGAACAAGGGAGACAGATTCATGCAAATATTGTAAAACTAGACTGTGCTTTTGATCCTTTTAGAGAAGTGTTTGAAGTTGCACGGAGAAGGAACACAATAGCCGTGTTGGATACAGGCTCTGGTAAGACCTTGATTGCGGTGATGATTATGAAAGAGGTTGGTCAAACCATCAAGTCTTTGGGAATGAAGAAGCTGATTGTTTTCTTGGCTCCCACACAATTCAATAATATAAGATATCTGACAGATTTTCAAGTTGAGGAATACTATGGGGCTAAAGGAGTTGATACATGGACTTTGAAGACATGGGAGCAGAAGATTAGTAACAATGATGTATTGGTTATGACACCTCAGATTCTTTTGGATGCCTTAAGAAAAGCATTCGTGCGTATGGAAATGATATGCTTGATTGTTATTGATGAATGTCATAGAGCAACTGGCAATCATCCCTATACAAAAATAATGAAGGAATTTTATCACCAAGCAAAGGAAAAGCCAAAGATTTTTGGGATGACAGCATCACCGGTTGGTAAAAGAGGTGTTTCCTCCACTACGGATTGTGAGGATCAAATATCAGAACTTGAAAGCATCTTGGATTCTCAGAGATATACTGTTGAAGATCGAACAGAGATGAGTAGATATATATTGTCTGCTAAAGAGAGTTGTAGATTTCATGACCAAGCACGATTTTCTGCCTTGAGTTTGAAACCAAAGATTGAAGCCTTGTGGTCCAAGTTTGATGCATTGTTATCAGAAAATAAAAGCAACTATATGGATGTGGAGAATAAATTTAAGACACTGTCTCAGCGAATGTCCAATGAACTTGGAAAAATTTTACATTGCCTTGAAGATCTTGGAATCCTATGTGCTTATGAGGCAGTTAAAATCTGTCACGAGAATTTCTCCAAAACTGAAGGAACGTGTGAAATTTACAGAACAGATGATAAAAACATTTTGGGGGTTGATTTTGATTATTCAAAGGCAGAAGATATGGGATACTTATCTCCAAAGTTACTTGAACTTATTAAAATCTTCCAATCACTTGGAGAATCTAGTCAGGTGTTGTGCCTTATTTTTGTTGATAGAATCATTACAGCTAAGGTGATTGAAAGATTTGCAAAGAAAGTTCCCCAAATTTCTCATTTCTCAGTTTCCTATTTAACTGGAAACAGTACATCGGTTGATGCTGTGGCTCCTAAAAGGCAGAAGGAAATATTGGAATCTTTTCGCTCTGGAAAGGTCAATCTATTATTTACTACTGATGTACTTGAGGAAGGAATTCATGTTCCAAACTGCTCATGTGTGATAAGATTTGACCTCCCAAAGACAGTTCGTAGTTATGTCCAATCTCGCGGAAGATCTAGGCAGGCTAACTCCCAATTTGTTGTGATGGGAAACCTGAAGCAAAGAGATCAACTCTTTGACATCATTAGGAGTGAGCGCTCCATGACTGATGCATCTATACATAAGGACCATGAATCTAATTTAAGGGTATTTACTGTGGGGAAAACAGATACATACTATGTGGATTCTACTGGAGCTTCTGTGACTTTAGATTCTAGTGTAAATCTTATCCACCGATACTGTGGAACACTTCCCCGAGATCAGTACTCCTCTGCAAAGCCCACTTATGATTTTCTGCCAGTGGAAGGGGGTTACCAATGTAAATTAACATTGCCATCTAATTCAGTCCTCCAGACAATAATTGGTCCATTAGGAAAACATATTCGTTTGGCAAGGCATCTTGCTTGTTTCGAAGCTTGTAAGAAGTTGCATCAAATGGGTGCTTTAAATGAACATTTGGTTCCATTCATCGAAGATGTTTCAGAAGATGACCATATCGTGAAAAATAAAGAATCTAGTTCAGGGGCAGGAACCACAAAGAGAAAGGAGTTACATGGAACAGCCAACATTTGTGCACTAAGTGGTGCATGGGGAGACAAACTTGATGTTGAAGCCAGATTTTTTGCCTACAAACTAGAATTCACATGTAGTATTGTTAACGAAATATACTCTGGGTTTGTTCTTTTGATTGAGTCAAAGCTTGATGATGATGTGGGAAATATTGAATCAGATCTGTATTTAGTCTCAAAGGTCGTGAAAGCTTCTGTCTCTTCATGTGGGCAAGTTGATTTGGATGCTAAACAGATGATGAAAGCAAAATGCTTCCATGAGCTTTTTTTCAATGGTTTGTTTGGTAGATTGGTGTTTAGGTCAAAATCAGCAGGAGGAGAAACAGAATTTTTACTACAAAAAGACACAAAATCATTATGGACAGCAAAACACTTATATTTGCTTCTACCACTTGAGAAATTGAATGGTATTTGTGAGGGAACCTTGCAAATTAATTGGCATGGAATTGATTCTTGTGCATCTGCTATTGAATTCTTAAGGAGAAGATATTCTTTGGTCACTGGAGATTGTGATGATAACGGAATAATCACATCACCTCAGGATACCAGTTCAATGGAGATGGAATATGTTGGAACAAACAAGATTCACTTTGCTAATTGTGTGCTTGATGCTGACAATATAAAAAACACGTTGGTTTTGGCGATTCATACTGGAAAAATATATTGTATTGTTGACATCGACAGTAACCTGTCTGCTGAAAGTCCTTTCTGTGGAAATAATGAAAAATCCAAGGAACGCTTTACCTACTCAGATTATTTCAGTAAAAGGTATGGGATTACCCTGAGACATCCAAGACATGCTCTATTACTATTAAAGCAAAGTCATAATCCACACAATCTTCTATTTAACTTTCATGAGGAAGACGCACGAGACAAATCATCACAAATTGGCTCTACAACCTCCAAAGTGCCTGCACATGTTCACGTCCCACCAGAGCTTTTATATGTTCTTGAATTTAAAAGAAACGTGTTGAGGTCATTGTACTTGTTGCCATCTCTAATGTACCGCATTGAATCATTAATGTTATCTAGTCAGCTTAGAGAAGAGATAGATGGTCAAACTAGCAAGTCCAACATAAATAGCTCACTGATTCTAGAGGCGCTTACAACTTTGAGATGCAGTGAAAATTTTTCAATGGAACGTCTTGAGTTGCTAGGAGATTCTGTTTTAAAGTATGTGGTGAGCTGTCACCTCTTTCTTAAATATCCCAAGAATCATGAAGGACATTTATCTGCCAAACGATCTCTAGCAGTTTGTAATTCAACCCTTCATAAATTGGCAATAGAACATAAATTACAGGGTTATGTTCGAGACTCTGCATTTGAACCACGACGTTGGGTTGCTCCAGGACAGCGTTCTATACACCCTGTTTGTTGTGATTGTGGATTGGAAACCCTTGAAGTGCCTTTAGATGTTAAATTCCACACTGAGGATCCCAAAGTTGTGGTTGGGAAGTTTTGTGACAGGGGTCACCGCTGGATGTGTTCTAAGACTATTTCTGACTGTGTTGAAGCTCTGATAGGAGCATACTATGTGGGGGGTGGACTATTTGCATCACTTAATGTGATGAAATGGCTTGGAATTGGAGCAGAACTTGAACTATCCTTGGTTGACGAAGCAATCACTGCTGCCTCTCTGCGTACTTGCATGCCAAAAGAAAGTGAGATTGCAAGCCTTGAAAAGAAAATTGGGTATGAATTTTCTGTCAAGGGACTCTTACTGGAGGCTATCACACATTTGTCTGAGAAAGAACTTGGGATTGGCTGCTGTTACGAGAGGCTTGAATTTCTTGGTGACTCAGTGTTGGACCTGCTTATCACATGGCATTTATATAAGAGTCACACAGATATTGATCCAGGGGTGTTGACTGACTTGCGATCTGCCTCTGTCAATAATGACAACTTTGCTCAAGTTGCTGTTAGACATAACCTTCACCAGCATCTCCTACATGGCTCAGGATTATTACTGAGCCAGATATCAGAATATGTGAAGGTCATTTCTGAATCGGATCCTAGATCACTTCCAAACATTAGAGCTCCGAAGGCACTTGGAGATCTAGTGGAAAGTATTGTTGGCGCAATGCTAATTGATTCCAAGCTCAGTCTAGACCGAGTGTGGGAGGTTTTCTGTCCTCTCTTATCCCCCATAGTTACACCTGAAAAACTTGAATTGCCCCCGTTTCGTGAATTAAATGAATTGTGCGATTCTCTTGGGTACTGTGTAAAAGTAAATGAAAACTGTGAAAAAAAGGGATCCATGATGCATGTTGAGGTTAGTGTACAGTTGCCAAATGATTTGTTGGTTCGTGAAGGAAAGGGGACAAATAAGAAAACTGCAAAAGGAGAAGCTTCTTTTCATTTGTTGAAGGACCTTGAGAAGCGGGGAATTTCATATTGTAATATCATGTCCAAGGGAAAAAGAGATAATTCTGTCCATATCAATGATTCACCTCATCTCAAAATGGATTCTAGTACTTGTTTTACTCGTAACGAAGAACATTCCTCAGAGTCGGTACATAAAAGGAACAGATTTGATGGAACTAACCCAACTGAAAGTATTTTGCCTCTCAAATACTCTTCTGGTGACGACTCTGGTTTTAGTGCTTCAATTCCAGTTAAGTTATCAATTAAAACGAAAAAGGGAGGACCACGGACCACACTATTTGAGGTGTGTAAGAAACTACAGTGGCCAGTGCCTGCATTTGCTTCAACAGAATATAAAGATAGATCTCTATTTGAATCCTGTGAAGGTCTGCAAGGAAGCAAGGGACTGAACTGTTTTGTTTCGAAAGTTACCTTGTGCATACCCAAGTATGGAAATATAGAGTGCCAAGGAGAAGCTAGAAGTGATAAGAAAAGCTCCTTTGACTCTGCTGCAGTTAAAATGCTTCTTGAGCTGCAAAAATTGGGAAAAGTTGAAATTGATCCTCCCCTTTCTAGTTAA 6756 0.4158 MQLRTRGTSTANALTSRAHQIHSHSHSLSLSHPHSPPQWFSILRQAIAASDLLLGKRAHARILTSGHHPECFLTNNLITMYAKCGSLSSARKLFDATPHEAKDLVTWNAILSAYAQADNPYDGLHLFCQLRHSALSTTRHTLAPVLKMCFLSGSSFASASLHGYALKIGLLWDVFVAGALVNIYSKFGRIREARLLFDGMAVRDVVLWNLMMKAYVDTCLEHEALLLFSEFHRTGLRPDDVTLRALARVSMSRNTAFESQLKQLRAYATKLFIRDSDNSDVIAWNKTLSRCLQRGEAWEAVDCFRDMIKSSVACDSLTFVVMLSVAASLNCLELGKQIHGAVIRTELDQVVSVGNSLINIYVKAGSVSRARSVFGQMNEVDLISWNTMISGFALNGLEECSVGFFVDLLRDGLLPDQFTIASVLRACSSLEQGCHLATQIHTYAMKAGVVLDSFVSTTLIDVYSKSGRTEEAEVLFVNQDDLASWNAMMHGYIMRDDFHKALRLYSILHESGERGDQITVVNAAKAAGGLVGLEQGRQIHAVVVKRGFNLDLFVISGVLDMYLKCGEVESASRVFTEIPSPDDVAWTTMISGCVENGQEDHALSTYHQMRLSRVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLDCAFDPFREVFEVARRRNTIAVLDTGSGKTLIAVMIMKEVGQTIKSLGMKKLIVFLAPTQFNNIRYLTDFQVEEYYGAKGVDTWTLKTWEQKISNNDVLVMTPQILLDALRKAFVRMEMICLIVIDECHRATGNHPYTKIMKEFYHQAKEKPKIFGMTASPVGKRGVSSTTDCEDQISELESILDSQRYTVEDRTEMSRYILSAKESCRFHDQARFSALSLKPKIEALWSKFDALLSENKSNYMDVENKFKTLSQRMSNELGKILHCLEDLGILCAYEAVKICHENFSKTEGTCEIYRTDDKNILGVDFDYSKAEDMGYLSPKLLELIKIFQSLGESSQVLCLIFVDRIITAKVIERFAKKVPQISHFSVSYLTGNSTSVDAVAPKRQKEILESFRSGKVNLLFTTDVLEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRSRQANSQFVVMGNLKQRDQLFDIIRSERSMTDASIHKDHESNLRVFTVGKTDTYYVDSTGASVTLDSSVNLIHRYCGTLPRDQYSSAKPTYDFLPVEGGYQCKLTLPSNSVLQTIIGPLGKHIRLARHLACFEACKKLHQMGALNEHLVPFIEDVSEDDHIVKNKESSSGAGTTKRKELHGTANICALSGAWGDKLDVEARFFAYKLEFTCSIVNEIYSGFVLLIESKLDDDVGNIESDLYLVSKVVKASVSSCGQVDLDAKQMMKAKCFHELFFNGLFGRLVFRSKSAGGETEFLLQKDTKSLWTAKHLYLLLPLEKLNGICEGTLQINWHGIDSCASAIEFLRRRYSLVTGDCDDNGIITSPQDTSSMEMEYVGTNKIHFANCVLDADNIKNTLVLAIHTGKIYCIVDIDSNLSAESPFCGNNEKSKERFTYSDYFSKRYGITLRHPRHALLLLKQSHNPHNLLFNFHEEDARDKSSQIGSTTSKVPAHVHVPPELLYVLEFKRNVLRSLYLLPSLMYRIESLMLSSQLREEIDGQTSKSNINSSLILEALTTLRCSENFSMERLELLGDSVLKYVVSCHLFLKYPKNHEGHLSAKRSLAVCNSTLHKLAIEHKLQGYVRDSAFEPRRWVAPGQRSIHPVCCDCGLETLEVPLDVKFHTEDPKVVVGKFCDRGHRWMCSKTISDCVEALIGAYYVGGGLFASLNVMKWLGIGAELELSLVDEAITAASLRTCMPKESEIASLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYERLEFLGDSVLDLLITWHLYKSHTDIDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHGSGLLLSQISEYVKVISESDPRSLPNIRAPKALGDLVESIVGAMLIDSKLSLDRVWEVFCPLLSPIVTPEKLELPPFRELNELCDSLGYCVKVNENCEKKGSMMHVEVSVQLPNDLLVREGKGTNKKTAKGEASFHLLKDLEKRGISYCNIMSKGKRDNSVHINDSPHLKMDSSTCFTRNEEHSSESVHKRNRFDGTNPTESILPLKYSSGDDSGFSASIPVKLSIKTKKGGPRTTLFEVCKKLQWPVPAFASTEYKDRSLFESCEGLQGSKGLNCFVSKVTLCIPKYGNIECQGEARSDKKSSFDSAAVKMLLELQKLGKVEIDPPLSS 2251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g02075 2251 FunFam Endoribonuclease dicer-like 1 1149 1245 - -
Vian4g02075 2251 FunFam Endoribonuclease dicer-like 1 1821 1991 - -
Vian4g02075 2251 Gene3D Tetratricopeptide repeat domain 8 159 IPR011990 GO:0005515
Vian4g02075 2251 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 204 238 IPR002885 -
Vian4g02075 2251 Pfam Ribonuclease III domain 1651 1785 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 Pfam Ribonuclease III domain 1863 1969 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 CDD RIBOc 1633 1797 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 Pfam PAZ domain 1474 1610 IPR003100 GO:0005515
Vian4g02075 2251 SUPERFAMILY PAZ domain 1475 1589 IPR036085 GO:0005515
Vian4g02075 2251 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 2041 2064 IPR014720 -
Vian4g02075 2251 FunFam Endoribonuclease dicer-like protein 654 878 - -
Vian4g02075 2251 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 381 415 IPR002885 -
Vian4g02075 2251 FunFam Endoribonuclease dicer-like 1 961 1121 - -
Vian4g02075 2251 Gene3D - 655 874 IPR027417 -
Vian4g02075 2251 FunFam Pentatricopeptide repeat-containing protein At4g33170 283 432 - -
Vian4g02075 2251 ProSiteProfiles Ribonuclease III family domain profile. 1614 1786 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 ProSiteProfiles PAZ domain profile. 1475 1589 IPR003100 GO:0005515
Vian4g02075 2251 CDD DEXHc_dicer 656 840 - -
Vian4g02075 2251 SUPERFAMILY RNase III domain-like 1826 1990 IPR036389 GO:0004525|GO:0006396
Vian4g02075 2251 Gene3D Ribonuclease III domain 1615 1797 IPR036389 GO:0004525|GO:0006396
Vian4g02075 2251 SMART PAZ_2_a_3 1450 1613 IPR003100 GO:0005515
Vian4g02075 2251 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 657 826 IPR014001 -
Vian4g02075 2251 CDD RIBOc 1843 1991 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 Gene3D paz domain 1462 1587 - -
Vian4g02075 2251 SUPERFAMILY RNase III domain-like 1625 1804 IPR036389 GO:0004525|GO:0006396
Vian4g02075 2251 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Vian4g02075 2251 Gene3D Tetratricopeptide repeat domain 280 431 IPR011990 GO:0005515
Vian4g02075 2251 FunFam Uncharacterized protein 508 637 - -
Vian4g02075 2251 CDD SF2_C_dicer 966 1097 - -
Vian4g02075 2251 Pfam PPR repeat family 581 628 IPR002885 -
Vian4g02075 2251 NCBIfam pentatricopeptide repeat 484 514 IPR002885 -
Vian4g02075 2251 NCBIfam pentatricopeptide repeat 584 618 IPR002885 -
Vian4g02075 2251 SMART helicmild6 1003 1090 IPR001650 -
Vian4g02075 2251 Pfam Dicer dimerisation domain 1154 1239 - -
Vian4g02075 2251 Gene3D Tetratricopeptide repeat domain 532 641 IPR011990 GO:0005515
Vian4g02075 2251 Gene3D Tetratricopeptide repeat domain 160 271 IPR011990 GO:0005515
Vian4g02075 2251 Gene3D Tetratricopeptide repeat domain 432 531 IPR011990 GO:0005515
Vian4g02075 2251 Gene3D Ribonuclease III domain 1823 1993 IPR036389 GO:0004525|GO:0006396
Vian4g02075 2251 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 973 1125 IPR001650 -
Vian4g02075 2251 Pfam Helicase conserved C-terminal domain 976 1087 IPR001650 -
Vian4g02075 2251 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 582 616 IPR002885 -
Vian4g02075 2251 Gene3D - 960 1124 IPR027417 -
Vian4g02075 2251 SMART riboneu5 1842 1993 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 SMART riboneu5 1633 1806 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 MobiDBLite consensus disorder prediction 2101 2117 - -
Vian4g02075 2251 ProSiteProfiles Ribonuclease III family domain profile. 1827 1970 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 1154 1244 IPR005034 GO:0016891
Vian4g02075 2251 Pfam Type III restriction enzyme, res subunit 658 808 IPR006935 GO:0003677|GO:0005524|GO:0016787
Vian4g02075 2251 ProSitePatterns Ribonuclease III family signature. 1863 1871 IPR000999 GO:0004525|GO:0006396
Vian4g02075 2251 FunFam Dicer-like 104 1609 1798 - -
Vian4g02075 2251 Gene3D Dicer dimerisation domain 1149 1246 IPR038248 -
Vian4g02075 2251 FunFam Dicer-like 104 1466 1586 - -
Vian4g02075 2251 Gene3D - 2160 2240 - -
Vian4g02075 2251 Pfam PPR repeat 383 413 IPR002885 -
Vian4g02075 2251 Pfam PPR repeat 206 233 IPR002885 -
Vian4g02075 2251 Pfam PPR repeat 105 131 IPR002885 -
Vian4g02075 2251 Pfam PPR repeat 355 379 IPR002885 -
Vian4g02075 2251 Pfam PPR repeat 179 202 IPR002885 -
Vian4g02075 2251 Pfam PPR repeat 75 95 IPR002885 -
Vian4g02075 2251 Pfam PPR repeat 484 512 IPR002885 -
Vian4g02075 2251 Pfam PPR repeat 457 476 IPR002885 -
Vian4g02075 2251 PANTHER DICER-RELATED 664 2071 - -
Vian4g02075 2251 SMART ultradead3 647 839 IPR014001 -
Vian4g02075 2251 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 103 137 IPR002885 -
Vian4g02075 2251 MobiDBLite consensus disorder prediction 2101 2120 - -
Vian4g02075 2251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 698 1095 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g02075 Vian-Chr4 37597767 37622278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g02075 141 653 Glycoside Hydrolase AT3G49170 29.401 9.33e-60 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g02075 K11592 - gmx:100806831 2621.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g02075 4 37597767 37622278 Vian4g02075 4 37597767 37622278 ECH
Vian1g00461 1 4264870 4274122 Vian4g02075 4 37597767 37622278 ECH
Vian4g00389 4 4425253 4438194 Vian4g02075 4 37597767 37622278 ECH