Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00389 ATGGCATCTTCGGAGAATGAACCTTCTTCTCACTCTTCACCTCCTCCTCCTCCCGCAAATATTTGTTTGCAAAAGTTCCGGCTCTATGAGACGCTATCGAACTTTTACATGATAGGAAGGGACAACAGCAGGACTTATTGGAAAGTGTTAAAGATTGACCGTCTAGATCCATCCGAGCTGAGTGTGCTTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTGTTGAGACGTATACATGAGGGGAATAGGTCCACAGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATAAAATTTTTAGGGCCATACTACATGGTGGTCATCACAAAAAGAAGGCAAATTGGTGCCATCTGTGGTCATACAGTATATGCTGTCTCAAAGAGTGAGATGATTCCACTGCAAAATCCTTCTGTTCAATCTAACATCGATGAGAACAGATACAAGAAACTCCTATTAACGGTTGACCTTTCGAAGGATTTCTACTTTAGCTACTCATACTATATCATGCGTAGTCTTCAAAGGAATTTGTGTGATAGTGAGACAGGCCACGTCCTTTATGAGAACATGTTTGTCTGGAATGAGTTTTTGACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTTGCACTGGTATATGGCTTTTTTAAACAGGAAACACTTGAAATATCTGGACGGGAGTTCATTCTTACTCTCATTGCAAGACGATCTCGCCATTATGCTGGTACTAGGTATTTGAGACGAGGATTAAATGACAAGGGTAGAGTAGCAAATGATGTGGAGACAGAGCAAATTGTATTTGAGGATGTTCCTGAAGGTCTTCCAGTCCAAATATGCTCTGTTGTGCAGAATCGGGGTTCAATCCCCCTGTTCTGGTCACAGGAAACTTCACGTCTGAATCTTAAGCCTGATATCATATTGTCAAAGAAAGATCAGAATTATCAAGCCACCAAACTTCACTTTGAAAATCTCATCAAAAGATACGGGAATCCCATAATAATTTTGAATTTGATAAAGTCACATGAGAGGAAGCCTCGCGAGTCCATTCTTCGTTCCGAGTTTGGTAATGCCATCAATTTCATTAACAAAGATTTATCAGAGGAGAACAGATTGAGGTTTCTTCATTGGGATCTTAAACATTTTCAGAGCAAAGCTACAAATGTTTTGCTACTTCTGGGAAAAGTGGCTACATATGCTTTGACATTAACAGATTTTTTATATTGCCAAGTGTCACCAACTCCTAGACTCGAAGAATGTATAGAAAGGCCACCTATTAATTTTGCATATGACAATATTGATAAGGGAAGCGTTCAACCCACGAGACATGTTGATGTTGACAACGAAGTTGGTAATAATTTAGAGAGAAAACCTAGTGGAGAAGACAACCATGCTAACGGAAACCATTTTGTTAAGCCACCCATGTTCCAAAGGGGGGTTCTTCGAACTAATTGTATAGACTGCTTAGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAGCTTCATGCTCTGGGAATTATTGACCACCTGAAAATTGACCTTGATGATCCTGTAAGTGATGATTTGATGGGATTTTATGAGCGGATGGGTGATACTCTTGCACATCAGTATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGAGAGGAGGGGACAATGGAAAGCTGCAACACAATCCCAGGAGTTCTTTAGGACTCTTCAACGATATTACAGCAATGCTTACATGGATGCTGAGAAGCAAAATGCAATTAACATATTCCTGGGGCATTTTCAGCCACAAGTGGGTAAGCCTGCTCTATGGGATTTGGGCCCAGATCAACATTATGATATAGGGAGACATGGGGATGATGATGCAAGGTCATTTGTCAAAAGGTGTTTCTCGGATGGAAGCATCATTCATGGCAGGTCCTTACCCACGTCAGCCTCAAATTCAAATATTGAAAAATTCTCAAAGCTAGGTTTGCAGAACCAATCAGAAGAAGGAAACAATGATTTTTGTGACTCATTGCCTGAAATATCAACATTTGAGAGTGACATGGCATTTTCAAGGTACACTCCCTCATTGCCTCGTCGACAGCTTTTTGTAGACGCACCAAGAGAGCGGTACCTTGATGGTGAACATATTTCACATTCTGCACATGAGGCTTCATTCAGCAGTTCCAACTTTGTTGACCTGGATTGGCTGTCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATTTGAAAGGTTTTCAATTGCCAATTCTTCTATTGCTAGGAATTCTTCAGAAAATGTTATCAATGGAGTTATTATAGGAGGAGATACTCCCTCCAGCAGCGTTTTAGACTCAAACACTAAGGGAAGAGAGCGAACTGGGTCAGAGTTATCCTACCGTGATGCCCAGTCCAAAGTTCTAGAGGAATATCCTGATACTTTTGTACAATGGGTGAATAATGGACAGACACTTTGCAATTGA 2502 0.4085 MASSENEPSSHSSPPPPPANICLQKFRLYETLSNFYMIGRDNSRTYWKVLKIDRLDPSELSVLEDSTTYTESECSDLLRRIHEGNRSTGGLKFVTTCYGIVGFIKFLGPYYMVVITKRRQIGAICGHTVYAVSKSEMIPLQNPSVQSNIDENRYKKLLLTVDLSKDFYFSYSYYIMRSLQRNLCDSETGHVLYENMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQETLEISGREFILTLIARRSRHYAGTRYLRRGLNDKGRVANDVETEQIVFEDVPEGLPVQICSVVQNRGSIPLFWSQETSRLNLKPDIILSKKDQNYQATKLHFENLIKRYGNPIIILNLIKSHERKPRESILRSEFGNAINFINKDLSEENRLRFLHWDLKHFQSKATNVLLLLGKVATYALTLTDFLYCQVSPTPRLEECIERPPINFAYDNIDKGSVQPTRHVDVDNEVGNNLERKPSGEDNHANGNHFVKPPMFQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHLKIDLDDPVSDDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWKAATQSQEFFRTLQRYYSNAYMDAEKQNAINIFLGHFQPQVGKPALWDLGPDQHYDIGRHGDDDARSFVKRCFSDGSIIHGRSLPTSASNSNIEKFSKLGLQNQSEEGNNDFCDSLPEISTFESDMAFSRYTPSLPRRQLFVDAPRERYLDGEHISHSAHEASFSSSNFVDLDWLSSSGNSCEEEPFERFSIANSSIARNSSENVINGVIIGGDTPSSSVLDSNTKGRERTGSELSYRDAQSKVLEEYPDTFVQWVNNGQTLCN 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00389 833 MobiDBLite consensus disorder prediction 785 806 - -
Vian4g00389 833 ProSiteProfiles Sac phosphatase domain profile. 158 554 IPR002013 GO:0016791
Vian4g00389 833 Pfam SacI homology domain 98 389 IPR002013 GO:0016791
Vian4g00389 833 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 10 824 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00389 Vian-Chr4 4425253 4438194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00389 23 833 Acyl Lipid Metabolism Gene Families AT3G43220 60.024 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00389 K22913 - gmx:100786438 1410.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00389 4 4425253 4438194 Vian4g02075 4 37597767 37622278 ECH
Vian4g00389 4 4425253 4438194 Vian4g00389 4 4425253 4438194 ECH
Vian1g00461 1 4264870 4274122 Vian4g00389 4 4425253 4438194 PCT