Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian1g00461 ATGGCATCGTCAGAGAATGAACCTTGTCACTCTCCTATCTCTAATCAAACCCGTCCTCCTCCTCCTTTCAATGTCTGTATACAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGACCAGGACATATTGGAGAGTACTAAAGATTGACCGTCTAGATCCTTCTGAACTAAACTTGCGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCCGATCTTTTGAGACGGATACATGAGGGTAACAAGTCAACAGGTGGACTTAAATTTGTTACAACTTGTTATGGAATTGTAGGGTTCATAAAATTTTTGGGACCTTACTACATGGTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTGTATGGTGTCTCTAAGAGTGAGATGATTCCATTGCCATATTCTTCAGTTGGGTCTAACATCAATGATAAAAATGAAAACAGGTACAAGAGGCTCTTATGCATGGTCGACCTTACAAAGGACTTCTTTTTCAGTTACTCATATCACATCATGCATAGTCTTCAGAGGAACATGTGTGATAATGAGACAGGCCATTTTCTTTATGAGACCATGTTTGTTTGGAATGAGTTCTTAACAAGGGGGATTAGAAATCACCTCCAAAATACTATTTGGACAGTTGCACTAGTTTATGGCTTTTTTAAACAGGATACACTCATGATATCCGGACGGGAGTTTATACTTACACTCATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAAGGCAGAGTAGCAAATGATGTTGAGACAGAACAAATGGTTTTTGAGGATGTTCCAGAAGGCTTTCCCATGCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCCCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATTAAACCAGATATTATATTGTCAAAGAGGGATCAGAATTATCAAGCCACTAGACTTCACTTTGAAAACCTCGTCAAAAGATATGGGAATCCCATTATTATTTTGAATTTGATTAAGACCCATGAGAAGAAGCCTCGTGAGTCCATACTTCGGGCAGAGTTTGCTAATGCAATAGATATTATTAATAAGGATTTATCTGAGGAGAACAGGCTTAGGTTTCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAATGTCTTGCAGCTTCTGGCCAAAGTGGCTGCATATGCATTGACATTAACAGGTTTTTTCTATTGCCAAGAAACACCGACATTGAGACTAGAAGAATCTCTAAATTGGCCAACTACAGACAATGTTAAGGCAACCTATTCACCTACTAGACTTGTCAATGATGATAACAAGGATGCTAACAATTTAGAAAGGAAACCAATTGAAGGAAACCATGATGTCATTGAAACTCATTCTACCAAACCTCCCAAGTTGCAGACGGGAGTTCTCAGGACCAACTGCATTGACTGTTTGGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGACACCAGCTCCATGCTGTGGGAGTTATTGACCACCCAAAAATTGATCTCGATGATCCTGTAGCTGATGATTTAATGGGTTTTTATGAGCGGATGGGTGATACTCTTGCTCATCAGTATGGTGGTTCAGCAGCGCACAATAAGATTTTCTCTGAGAGGAGGGGTCAGTGGAGAGCTGCAACACAGTCTCAAGAGTTTTTTAGGACTCTTCAACGCTATTACAGCAATGCATACATGGATGCTATGAAACAGAATGCAATTAATGTATTTCTGGGGCATTTTCAACCACAACAGGGTAAGCCTGCTCTATGGGAGTTGGATTCAGATCAACTCTATGATACAGCAAGACCTGGAGAGGATGATTCAAGGTCATTTTTTAAAAGATCCTTCTCAGATGGGAACATTCTTAATGAAAGTTCCACACCAATGTCAGCCCCAAATGCCAGCCACGTAAAATTCCAAAGCCAATACTTGTCAGATCGATTAGAAGATGGAGGCAAGGATCTTTGTGAATCATCACCCGAAATATCTTCTGCTGAGAATGACATCTCGTTTTCAAGGTACACTCCCACAATGCCTCGGAGACATCTCTTTGGAGATATGCAAAGAGAGCGTTGCGTTGAAAGTGATCATATTTGCTATTCTGATCACGGAGATTCCTTCAGCTGCTCCAACTTTGTTGATCTGGATTGGCTGTCTTCTTCAGCAAATTCATGTGAAGAAGAGCCATTTGAGAGATCATCAATCACTAACTCTCCAATTGCCGGAGTTTCTTCCGAAAATGTTGTCAATGGAATAATGGTAGGAGAAGCAACTGCCTCCACAAGTGATTGGGGGGCCTCCAGCCTAAAGGGAAGAGGGCGAACTGAATCTGAGTTACCGTATGGTAATTCACAATCCAACACAGGAGAGGAATTTCCAGATACTTTTGTACAATGGGTGACTTATGGACAAACACTTTGCCATTGA 2514 0.4077 MASSENEPCHSPISNQTRPPPPFNVCIQKFRLYETRSNFYMIGRDKTRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMVLITKRRQIGAICGHTVYGVSKSEMIPLPYSSVGSNINDKNENRYKRLLCMVDLTKDFFFSYSYHIMHSLQRNMCDNETGHFLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQDTLMISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQMVFEDVPEGFPMQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKRDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRAEFANAIDIINKDLSEENRLRFLHWDLHKHFQSKATNVLQLLAKVAAYALTLTGFFYCQETPTLRLEESLNWPTTDNVKATYSPTRLVNDDNKDANNLERKPIEGNHDVIETHSTKPPKLQTGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHAVGVIDHPKIDLDDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQNAINVFLGHFQPQQGKPALWELDSDQLYDTARPGEDDSRSFFKRSFSDGNILNESSTPMSAPNASHVKFQSQYLSDRLEDGGKDLCESSPEISSAENDISFSRYTPTMPRRHLFGDMQRERCVESDHICYSDHGDSFSCSNFVDLDWLSSSANSCEEEPFERSSITNSPIAGVSSENVVNGIMVGEATASTSDWGASSLKGRGRTESELPYGNSQSNTGEEFPDTFVQWVTYGQTLCH 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian1g00461 837 ProSiteProfiles Sac phosphatase domain profile. 165 557 IPR002013 GO:0016791
Vian1g00461 837 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 19 796 IPR043573 GO:0043813|GO:0046856
Vian1g00461 837 MobiDBLite consensus disorder prediction 792 819 - -
Vian1g00461 837 Pfam SacI homology domain 102 398 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian1g00461 Vian-Chr1 4264870 4274122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian1g00461 26 837 Acyl Lipid Metabolism Gene Families AT5G20840 62.621 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian1g00461 K22913 - gmx:100810079 1517.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00461 1 4264870 4274122 Vian4g02075 4 37597767 37622278 ECH
Vian1g00461 1 4264870 4274122 Vian1g00461 1 4264870 4274122 ECH
Vian1g00461 1 4264870 4274122 Vian4g00389 4 4425253 4438194 PCT