Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01894 ATGGAATCAACTCATGTAATATCCATTACAAATGGTGAAGACAATGTTGCTCCAAGGAAGAATACTACTAAAACGTTTAAATTTTCACTTCCACCAGTTTCTTCCCTTCTTAGAGAAAACAAAATGAAAGACGCTAAAAAAATTATCCACAGCATCAAAGTTGGAATCTCCCTTGCTTTGATTTCACTTCTGTACCTCTTGGATCCTCTTTACGAGCAAGTTGGAGAAAATGCTATATGGGCTATCATGACTGTGGTCGTCACCTTCGAATTTTCCGCAGGAGCTACTCTAGGAAAAGGTTTAAATCGCGGAATGGGAACTATATTAGGAGGTGGACTGGGTTGCATAGCAGCAGTTTTGGCTCAAAATATTGGTGGAGTTGGCAACTCGATTATAATTGGTGCTTCAGTATTTATCTTTGGGACAATTGGAACATATTTTCGACTATTCCCGAGCGTGAAGAAGAGATACGATTATGGAGTGATGATTTTGATTCTGACTTTTAGTTTGATTGTGGTGTCTGGTGTGCGCACTGAAGATCAGAAAGTTTGGGAAATAGCAGTTGAACGGCTTTTAACAATTGTGATGGGTTTCGTTGTGTGCATTTGTGTGAGCTTGTTGATCTTCCCCTTGTGGGCCAGTGATGAACTTCATGATTCCATTGTCTCTAGATTCCAACACATTGCTGATTCATTACAAGGGTGCATGGAGGAATATGTCAAATTCGTTAGTCAAAAAGAAAATAAAAAGCCTGGTGCTAGCTTCAGTGTTTGCAAGTCGTTCTTGGACTCCAAATCAAAGGACGAGGTGCTGGCAAACTTTGCAAAATGGGAACCCTGGCGTGGAAAATTTGGATTTTTCTATCCTTGGGAGAAGTACCTAAAGATTGGAGACGTTCTTCGAGAACTAGCTGCAATAATTCTTGCTTTGGGAGGTTGCCTCCAGGCCTCAGAAACGGCCATGAAAGTGGAACCAGTGAGTCAAAGTGTTCAAATGGAACCATGTGAGGCAATTGGGTCAGGAATTGTGTGGAGTCTGCGAGAACTTGGGGAGAGCATGAAGCAAATGAGCAAGTGTGAGGCTGACATATCAGAAAAGTTGAAGACAATGAGAGGAGAGATAAACTTGGTAATTTCCACGTCGAAAATTGCAGCAATTGATAACATGGATGCACTTGCAGTGGCGAGCTTCGTCTTCTTATTGAAGAAAGTTGTGGAGAAAGTAGAAGAACTTACCAAAGAGGTTACATTGTGGGTGTTATCAAAAGGGTTAGTGTCATATGTGATGGAGAAGGAAGGAAGAAAGGAGAGAGGGAATGACATGGAATGGGTGCTGGGAAGTTGA 1344 0.4159 MESTHVISITNGEDNVAPRKNTTKTFKFSLPPVSSLLRENKMKDAKKIIHSIKVGISLALISLLYLLDPLYEQVGENAIWAIMTVVVTFEFSAGATLGKGLNRGMGTILGGGLGCIAAVLAQNIGGVGNSIIIGASVFIFGTIGTYFRLFPSVKKRYDYGVMILILTFSLIVVSGVRTEDQKVWEIAVERLLTIVMGFVVCICVSLLIFPLWASDELHDSIVSRFQHIADSLQGCMEEYVKFVSQKENKKPGASFSVCKSFLDSKSKDEVLANFAKWEPWRGKFGFFYPWEKYLKIGDVLRELAAIILALGGCLQASETAMKVEPVSQSVQMEPCEAIGSGIVWSLRELGESMKQMSKCEADISEKLKTMRGEINLVISTSKIAAIDNMDALAVASFVFLLKKVVEKVEELTKEVTLWVLSKGLVSYVMEKEGRKERGNDMEWVLGS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01894 447 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 37 415 - -
Vian3g01894 447 Pfam Aluminium activated malate transporter 43 378 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01894 Vian-Chr3 22233646 22237867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01894 43 380 Miscellaneous Gene Families AT4G17970 40.118 5.77e-87 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01894 K25841 - gmx:100527892 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01894 3 22233646 22237867 Vian3g01894 3 22233646 22237867 ECH
Vian2g02096 2 40692945 40695110 Vian3g01894 3 22233646 22237867 PCT
Vian2g02559 2 46240827 46242908 Vian3g01894 3 22233646 22237867 PCT