Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02096 ATGGAATCAACTCACGTAATAGCCATTACAAATAGAGAAGAAGATAATTTACCACATACAACCAAGGAGAGCAAAACATTCCAATTTTCCCATCTTGGGAAAAATGAAGTCCACTGTGTTTCCATTACCTTCAGTGCCAGACACAAGCAGATGCAGAGAGACCAAGACACAAGGAAGATGATTCACTGCATCAAAGTAGGAATCTCCTTGGTTTTGGTTTCACTTCTGTACCTCTTGAACCCTGTCTTTAAGCAACTTGGAGAAAATGCAATGTGGGCTATCATGACAGTTGTGGTCATGTTTGAATTCTCTGCAGGGGCCACACTAGGAAAGGGCTTCAACCGTGGACTAGGAACTATTATAGGAGGAGGACTAGGTTGCTTAGCAGCACTTTTTGCACAAAGCATTGGGATTGGCAGGGTTGGCAACTCCATCATAATCGCTGCTTCTGTATTTATACTTGGATCATTTGCCACATATCTTCGACTGGTTCCAAGCATAAAGAAAAGATACGATTATGGAGTGATGATATTCTTGCTGACTTTCAATCTAGTTGTGGTTTCTGTCACACGAGTGAATGTGAAAGTGTGGGAATTAGCCGGCGAACGTCTCTTGAATATACTGATGGGCTTCATCGTATGCGTCTGTGTGAACTTGCTCGTCTTTCCTTTGTGGGCCAGTGATGAACTTCACGATTCCATCGTCTCCAGATTCCTTGACCTTGCCAATACAATTCAAGGTTGTTTAGGCAAATGTACCAAAATGATTAACGAAAAGGAAAATCAACCCTGTTCTAGCTTCAACGTTTGCAAGTCAGTATTGAACTCCAAGTCAAAGGATGAATCACTGGCAAATTTCGCAAACTGGGAACCCTGGCATGGAAAATTTGGATTTTCCTACCCTTGGGAAAGGTACTTAAAGATTGGGGAGATTCTTCGCGAACTGGCTGCATTTATTCTTGCAATGCATCGTTGCCTCGAAGCATCAAAAGAGCCCATGGCCACATTGAGAGAATCACAATGGGTCTATTTAGAAACATGCGAAGCACTTGAGTCAAAGGTTGCATGCGTTCTGCAAGAACTAGGAGACAGCATGAAGCAAATGATGAAATGTAATGCAAAGGGTTGTGTTTCGGAGCAGTTGAAAGCCGCCAGAGAAGATTTAAGCTTCATAATTTCCACGTTCAAAATGGCACAACTTGAGGATGATCAAGTGCTATCCATTGCTAGCTTCGTCTTCTTGCACATGGAAGTGATGCGGAAGGTTGAGGAACTGGTGAAAGAGGTGGAAGAACTTGGAGAAATCGCAGGTTTTCGCACCCCAATAACTGCATTGTCTTCGTAG 1344 0.4293 MESTHVIAITNREEDNLPHTTKESKTFQFSHLGKNEVHCVSITFSARHKQMQRDQDTRKMIHCIKVGISLVLVSLLYLLNPVFKQLGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIIGGGLGCLAALFAQSIGIGRVGNSIIIAASVFILGSFATYLRLVPSIKKRYDYGVMIFLLTFNLVVVSVTRVNVKVWELAGERLLNILMGFIVCVCVNLLVFPLWASDELHDSIVSRFLDLANTIQGCLGKCTKMINEKENQPCSSFNVCKSVLNSKSKDESLANFANWEPWHGKFGFSYPWERYLKIGEILRELAAFILAMHRCLEASKEPMATLRESQWVYLETCEALESKVACVLQELGDSMKQMMKCNAKGCVSEQLKAAREDLSFIISTFKMAQLEDDQVLSIASFVFLHMEVMRKVEELVKEVEELGEIAGFRTPITALSS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02096 447 Pfam Aluminium activated malate transporter 55 432 IPR020966 GO:0015743
Vian2g02096 447 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 37 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02096 Vian-Chr2 40692945 40695110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02096 55 394 Miscellaneous Gene Families AT5G46600 41.261 5.32e-88 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02096 K25841 - gmx:100802201 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02096 2 40692945 40695110 Vian2g02096 2 40692945 40695110 ECH
Vian2g02096 2 40692945 40695110 Vian3g01894 3 22233646 22237867 PCT