Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02559 ATGGATATTGAGTCAACAATGGAAGCAAACAAGGGAGGGTTTTTTGTCCATTGGAAGAACTGCCTCAAGGCTTTGCCTAGGAACATCAAGTCTATGGTTATCAACTTCACAAGGAGCATAACAAAGATTGGAAAAGATGACCCCAGACGAGTATTTCACTCATTAAAAGTTGCATTTGCTCTTACCTTGGTTTCCTTGTTTTACTACTCGAGGCCTCTTTATGATGGTTTCGGAGTCGCTGGAATGTGGGCTGTTCTGACAGTGGTGGTTGTATTTGAATTCAGCGTAGGTGCAACTCTCTGCAAATGTTTAAATAGAGGATGTGCTACATTATTAGCTGGTGCTTTAGGAGTTGGAGGGCAACACTTAGCTTCTGCTTTTGGAGAAAGAGAAAAACCTATTGTCCTTGGGATCCTAGTCTTCATTCTAGCCGCGGGAGCTACTTTTTGCAGATTTTTTCCGAAGATCAAGGCAAGATATGATTATGGGGTGGTGATATTTATTTTGACGTTCTGTTTAGTTGCTGTGTCGGGGTATCGAGTGGAAGAACTCTTTGAGCTTGCTCATCAGAGACTTTCAACAATTTTAATAGGGGTAACATCTTGCATGATCATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACCTTCACAAGTTGGTAGCTTCCAACATAGAAAAGTTGTCAAATTACCTACAAGGATTCGAAGTGGAATATTTTCATTGCTCAGAGGATAAAAAAAAGTGTGAGAAGTCAGTTCTTGAAGGATACAAAACTGTTCTCAATTCCAAAGCAAGTGAGGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCGGGACATGGCCGTTTTCGTCTTCGACATCCTTGGAAGCAGTACTTGAAGATTGGAGCACTTACTCGGGAATGTGCTTACAAGATTGAAACCCTTAACAACTACCTTAACCCGGAAATCCCTACATCTTTGGAATTCAAGTGTAAAATTCAAGAACCATGCACAAAGATGATTTCAGAATCAAACAAGGCGTTAAAAGTAATATCTTCATCAATCAAAACAATGACACATCCATCAGCTGCAAAAAGCCACATCGAAAATGCAAAAACTGCAGTTGAAGAGCTCAAATTTGCCCTTGAAACTGTTTCTTTGGAAGAAGCTGAACTCCTATCCATAATCCCTGTTGCCACAGTAGCTTCAATACTCGAAGAAATCACCAAGTCAGTGGAGAAAATATACGAGTCTGTTTCCGAGCTTTCTCACTTAGCCTACTTCAAGAGTGTTGCAGAACCCAATGTGTCACCAGAGAAGCCACACCTCCTTCATCGAGGTATCATAAAACCTGTTGTGGATATTGAAAACACAGTCGACCACGTTGAAATCACGATCCCAGAGATAACCACAGATTCACCAGAAAAAGAAAAGACAGCAAAACCCTCCGAACATATGTAA 1446 0.4115 MDIESTMEANKGGFFVHWKNCLKALPRNIKSMVINFTRSITKIGKDDPRRVFHSLKVAFALTLVSLFYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLCKCLNRGCATLLAGALGVGGQHLASAFGEREKPIVLGILVFILAAGATFCRFFPKIKARYDYGVVIFILTFCLVAVSGYRVEELFELAHQRLSTILIGVTSCMIISIFICPVWAGEDLHKLVASNIEKLSNYLQGFEVEYFHCSEDKKKCEKSVLEGYKTVLNSKASEESLANLARWEPGHGRFRLRHPWKQYLKIGALTRECAYKIETLNNYLNPEIPTSLEFKCKIQEPCTKMISESNKALKVISSSIKTMTHPSAAKSHIENAKTAVEELKFALETVSLEEAELLSIIPVATVASILEEITKSVEKIYESVSELSHLAYFKSVAEPNVSPEKPHLLHRGIIKPVVDIENTVDHVEITIPEITTDSPEKEKTAKPSEHM 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02559 481 Coils Coil 363 383 - -
Vian2g02559 481 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 26 427 - -
Vian2g02559 481 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02559 Vian-Chr2 46240827 46242908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian2g02559 1 463 Miscellaneous Gene Families AT3G11680 56.144 1.09e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02559 K25841 - gmx:100170704 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02559 2 46240827 46242908 Vian2g02559 2 46240827 46242908 ECH
Vian2g02559 2 46240827 46242908 Vian3g01894 3 22233646 22237867 PCT