Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01607 ATGGGACTGTATGAGCATTCAGATGTTATGCAGTGGGGTATTAATCTTTTTGACTCTGACCCTGCATATAGTCCTGGATACTATTGTGACATAATTCAACCTAATACTGGTGATGTCTATAATAATGGGCACTACTTCCATAGCCACTATGCTACTCAACGTAACCAAATAGAGAATGACGAGATCATTGCACGAGCTCTTCAAGAACAATTTTCACGACTAGATATTGATGATTGTTCAAGATATTCACAGACAAATGAAGAACAGTTCCATGCTTCTGAGCCAGCATATGATTGGCGTAACACATCAATGATGTATTGTTCTGGAGGTCATGATTATACCTACGATGGAATTGGGGACATAAAACCTTCTAGTTCATTATGTTGTAGGCCTTGTGAAGCAGAGGAAAGCTCAATGGAACTAACTGACAATTATCCACTTGACGATGAAATAGGGAGGAAATTGAGTCAGATGGTTCCAATTCCTCATGTTCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCATATGGTGCAAGGTGATGGTAATTGTCAGTTCCGTGCATTATCTGATCAGTTGTTTAACACACCTGATCACCACAACAATGTGAGACAAGAAGTTGTGAACCAGCTAAGGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATATGGCGAATATTTGGAGAAAATGTCCAAGAGTGGTGAATGGGGGGATCATGTCACTCTGCAAGCAGCCGCAGATTCGTATGGTGTTAGAATATTTGTGGTGACTTCATTCAAGGACACCTGTTGCATAGAGATTCTTCCTAATTTTGAGAATCCAAGAGGAGTGATTTTTCTTAGTTTTTGGGCTGAGGTGCATTACAACTCCATCAATCCTCAAGGAGATGCTTTCAAGAAAAGCAATCCTATTGACCCAGACATACCTTCAAGTGAATCAAAAAAGAAGAAAAGATGGTGGAACTTTGGGACCAAACATTAA 1050 0.3952 MGLYEHSDVMQWGINLFDSDPAYSPGYYCDIIQPNTGDVYNNGHYFHSHYATQRNQIENDEIIARALQEQFSRLDIDDCSRYSQTNEEQFHASEPAYDWRNTSMMYCSGGHDYTYDGIGDIKPSSSLCCRPCEAEESSMELTDNYPLDDEIGRKLSQMVPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHMVQGDGNCQFRALSDQLFNTPDHHNNVRQEVVNQLRSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAAADSYGVRIFVVTSFKDTCCIEILPNFENPRGVIFLSFWAEVHYNSINPQGDAFKKSNPIDPDIPSSESKKKKRWWNFGTKH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01607 349 Gene3D - 174 322 - -
Vian3g01607 349 MobiDBLite consensus disorder prediction 322 349 - -
Vian3g01607 349 PANTHER OTU DOMAIN CONTAINING PROTEIN 55 319 - -
Vian3g01607 349 CDD OTU_plant_OTU9-like 184 314 - -
Vian3g01607 349 FunFam OTU domain-containing protein 175 321 - -
Vian3g01607 349 ProSiteProfiles OTU domain profile. 193 317 IPR003323 -
Vian3g01607 349 Pfam OTU-like cysteine protease 199 285 IPR003323 -
Vian3g01607 349 SUPERFAMILY Cysteine proteinases 179 317 IPR038765 -
Vian3g01607 349 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01607 Vian-Chr3 17685565 17688661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01607 - - gmx:100811851 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01607 3 17685565 17688661 Vian2g02371 2 44128692 44132670 ECH
Vian3g01607 3 17685565 17688661 Vian3g00867 3 9301544 9308346 ECH
Vian3g01607 3 17685565 17688661 Vian3g01607 3 17685565 17688661 ECH
Vian2g02371 2 44128692 44132670 Vian3g01607 3 17685565 17688661 PCT