Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian2g02371 ATGGTTTTATATGAGCATTCGGATGTTTTTCAGTGGGGTCTTAATCTTCTTGATGGCGACCCTGCTTATAGTCCTGGATACTATGGCAACATAATTCAACATGATACTGGAGACATCTATAATGGACACTACTTCCATAACCATTATGATAATGAATGCGACTATGTAGAGAATGATGAGATCATTGCCCGTACACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCAGGATATTTTCAGCAAGGTGAACAACAGTTCCATGTTCCTGAGACTCAGCCTCCATATGATTGGCATAACTCTTCAATGATGAACTACTGTTCAGGAGATCATGATTATGCTCAAGAAGCAGTTGGTGATGGAGAACCCTCTAGTTCATGTTCTAGTCCTTGTGAAACAGAGGAATATTCATTGGAGCTAACTGACAATTATCCACTTGATAATGAAGTTGGGAGGAGACTGAGTCAAATGATACCAATTCCCCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGACGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGAACAAAGTACATGGCGATGGTAATTGTCAGTTCCGAGCACTGTCTGATCAATTGTATCACGCACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTCGATCAGCTTAAATCTAACCCAGAGATTTATGATGGATATGTTCCCATGGAGTACGATGATTATTTGGACAAGATGTCTAAGAGTGGCGAATGGGGTGATCATGTTACTCTCCAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAACCCAAAAGGAGTGATTTTCCTGAGTTTCTGGGCAGAGGTGCACTACAACTCCATTTATCCCCAAGGAGATATACCATCAAATGAATCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAG 1020 0.4049 MVLYEHSDVFQWGLNLLDGDPAYSPGYYGNIIQHDTGDIYNGHYFHNHYDNECDYVENDEIIARTLQEEFSQLEIAESSGYFQQGEQQFHVPETQPPYDWHNSSMMNYCSGDHDYAQEAVGDGEPSSSCSSPCETEEYSLELTDNYPLDNEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVENKVHGDGNCQFRALSDQLYHAPDHHKFVRRQVVDQLKSNPEIYDGYVPMEYDDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFENPKGVIFLSFWAEVHYNSIYPQGDIPSNESRKKKRWWSFGSKH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian2g02371 339 SUPERFAMILY Cysteine proteinases 180 318 IPR038765 -
Vian2g02371 339 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
Vian2g02371 339 Gene3D - 175 322 - -
Vian2g02371 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 56 319 - -
Vian2g02371 339 CDD OTU_plant_OTU9-like 185 316 - -
Vian2g02371 339 FunFam OTU domain-containing protein 176 322 - -
Vian2g02371 339 Pfam OTU-like cysteine protease 201 286 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian2g02371 Vian-Chr2 44128692 44132670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian2g02371 - - aip:107648617 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02371 2 44128692 44132670 Vian3g00867 3 9301544 9308346 ECH
Vian2g02371 2 44128692 44132670 Vian2g02371 2 44128692 44132670 ECH
Vian3g01607 3 17685565 17688661 Vian2g02371 2 44128692 44132670 ECH
Vian2g02371 2 44128692 44132670 Vian3g01607 3 17685565 17688661 PCT